Erigeron canadensis (horseweed): 122588272
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Entry
122588272 CDS
T07610
Name
(RefSeq) AMSH-like ubiquitin thioesterase 2
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122588272
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122588272
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122588272
04121 Ubiquitin system [BR:
ecad04121
]
122588272
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122588272
Peptidases and inhibitors [BR:
ecad01002
]
Metallo peptidases
Family M67
122588272
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Others
Others
122588272
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
122588272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
122588272
NCBI-ProteinID:
XP_043616323
LinkDB
All DBs
Position
2:complement(40708928..40714098)
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AA seq
413 aa
AA seq
DB search
MTSVEGFSHDVQLFLDIIVRQATWVAGYKAQVYREEKNVIDLYVMLLRYSSLVLETIRFH
RDYPALSSKERTAFKKQLRVVIEELESLKPEVDRSADDSNKCHARTDECQTNGHGGTTHK
SVDSSFQLPPVNNSLSFVPDDKPLHQSESALSWNPNQGSTPYKQSGSVNIQLQKQWPCPA
EEECDENYFLSGNIRQPSPRPVLAQLQPKLSCIFPSRVADPRPGPANSSQADSRTYRHLH
IPVKIMEDFLRLAQQNTKQNLETCGILAGSLKNRTFQITTLIIPKQESTSHTCQTLNEED
IFEVHDKRSLYTLGWIHTHPSQTCFLSSVDLHTHYSYQSMLPEAIAIVMAPTDESRQHGI
FHLSDPAGLSLIRNCNQSGFHPHEKQEDSRPIYEECSHVYMNEMMNFDVVDLR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgtggagggatttagtcatgatgtacaactttttcttgacattatagtgaga
caggctacttgggtcgctggatataaagcacaggtatatcgagaggaaaagaatgttata
gatttgtatgttatgcttctaagatattcaagcctggtattggagactataagatttcat
cgtgactacccagctttatcttcaaaggaacgaacagctttcaagaagcaattacgtgtg
gtgatagaggagctcgaatccttgaaaccagaagttgaccgtagtgctgatgactcaaac
aagtgtcatgctagaactgacgaatgtcaaacgaatggccacggaggaaccacacataag
tcagtggattcttcttttcaactgcctcctgtgaataattcactttcttttgtccccgat
gataagccgcttcaccaaagtgaaagtgcgctttcctggaacccgaaccaagggagtact
ccatataaacaatctggctccgttaacatacagttacaaaagcaatggccatgtccagct
gaggaagagtgtgatgaaaattattttctttctggaaatatcaggcaaccttcaccccgt
cccgtgcttgctcaattgcaaccaaaacttagttgtatttttccatcacgagttgctgac
ccaagacctggtccagcaaactcatcccaggccgattcacgcacatatcggcatttacat
attcctgtaaagataatggaagattttttacgattggcacaacaaaatactaaacaaaac
ttggaaacatgtggaattcttgctggttctttgaaaaacaggactttccagatcaccacg
cttattattcctaagcaggagtcaacttcccatacgtgtcagacgttaaatgaagaagat
atatttgaggttcatgacaagcgttctctttatactcttggatggattcatacgcatcca
tcccaaacctgcttcttatcctcagttgatctgcacacacattactcataccagagtatg
cttccggaggcaattgcaattgtaatggcccctacagatgaatccagacaacatggaatt
tttcacctctctgaccctgctggactgagtctgattcggaactgtaatcaaagtggtttt
catcctcatgagaaacaagaagacagtaggccaatttatgaagaatgttctcatgtttat
atgaacgagatgatgaacttcgatgttgtggatcttcggtga
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