Erigeron canadensis (horseweed): 122588481
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Entry
122588481 CDS
T07610
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122588481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122588481
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122588481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
122588481
NCBI-ProteinID:
XP_043616543
LinkDB
All DBs
Position
2:32614758..32617946
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AA seq
344 aa
AA seq
DB search
MEDCDQCKVFVGGISWETTEEVLREHFRYYGNVVSSVIARDRITGSPRGFAFVSFADSSA
LDKVLGDSHNILGRTVEVKKAVPKGEQNQIQQEQNRGQSRNYRSNGIKSNDNYLKTKKIF
VGGLSANLTEDDFKIYFEKFGRITDVVVMHDNVTHRPRGFGFITFDTEDSVEEVMQRNFH
ELCGKLVEVKRAVPKEISGGTTSGNRESNFNGHQQAQFRPTYEVLPAYGPFPGYGGYPFG
GGVYGGAYPVSGYGLTPVSPRVPWGGPAMVSMRASPLPLPVFPAYLNGGLMGMAANGYNG
IVGPVPGGMPGQLIGNVVDNNSLGSSGGMEGSKNDQSGVGGNMV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaggattgtgatcaatgcaaggtgtttgttggtggaatttcatgggaaacaacagaa
gaggtgttgagggagcattttaggtactatgggaatgtagttagttcagtaattgctaga
gaccgaattacgggtagtcctcgtgggttcgcttttgtttcgtttgcagattcatcagct
cttgataaagttcttggtgacagtcataatatccttggcagaacggttgaagtgaaaaag
gctgtaccaaaaggtgaacaaaaccaaattcagcaagaacagaatcgtggacagagtagg
aattacagaagcaatggtattaaaagcaacgataattacttaaagactaaaaagattttt
gtaggtgggttgtctgctaacttaactgaagacgacttcaaaatctactttgaaaaattt
ggtagaataactgatgtggttgtgatgcatgacaacgtgacccacaggccacgtgggttc
gggttcataacttttgacaccgaggattccgtcgaagaagttatgcagagaaacttccat
gaattgtgtggtaaacttgtggaggttaaaagggcagttcctaaagagattagtggcggc
actactagtggcaatagggaatctaactttaatggtcatcaacaggctcagtttagacct
acatacgaggttcttcctgcttatggaccgtttccaggatatggtggttatcctttcggt
ggcggtgtctatggtggtgcctatccggttagtgggtatgggttaacacccgtttcgcca
agggttccatggggtggtcctgcaatggtcagcatgagggccagtccattgccattacca
gtttttccagcttacttaaatggtgggttaatgggcatggcagcgaatggatataacgga
attgtgggacccgtaccgggtgggatgcctggtcagctcattgggaatgttgtagataac
aattctttggggtcatctggtggtatggagggtagcaaaaatgaccaaagtggtgttgga
ggtaacatggtctga
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