Erigeron canadensis (horseweed): 122588493
Help
Entry
122588493 CDS
T07610
Name
(RefSeq) multisubstrate pseudouridine synthase 7 isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122588493
Enzymes [BR:
ecad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122588493
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122588493
Prokaryotic type
122588493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
122588493
NCBI-ProteinID:
XP_043616559
LinkDB
All DBs
Position
2:8575949..8589619
Genome browser
AA seq
739 aa
AA seq
DB search
MSLVTTKLVLVLNGRSRSGNQLKPCFNSLFNPKPSFSSSSCFYRFPSSQIKNNNNNYQYT
ESVTAMEESDVGICCYISPSLPGFRAILKQRYSDFVVNEVDLDGNIVHLTDLHPSTQIAE
EELEKKPPVDQLNANHDSDIDSFRALAGDSDADSLSDFINQLIINNNNSNNNSDIQDGAT
SIVLSPSSDKLHRTAVHNFFKQRLNFLVTDTVDGPDPYSKCIRVRFNSRGKNDTTRGSKK
RKGRGDTPYDSRGSDHWPEHLGKFLRFHLCKENKDTQEALGLIGKMLGIQPRSFGFSGTK
DKRAVTTQRVTVFKQHAHKVAALNKRLIGLKVGDFCYVNEGLLLGQLCGNRFTITLRGVV
ADSEDTVKTAADALGKHGFINYFGMQRFGSGSIPTHLIGAKLLKGEWEEAVRMILDPRDG
ERDDIRSIREYYKESEDIDGTLRQLPRFLVAEKAILQCLKKCPGNYLQALKAVPRTLRMM
YVHSYQSYLWNHAASMRVQKYGTDHVVLGDLVYCNEENSNEIKQIDDSVYEEIGPNESSE
NDHLDESETHVSEGNCTSVKVVNNEDIASGHYTVTDVVLPLPGSRVNYPQNDIEQYYKDL
ADKDGVSLTESVHNVKEFSLASMTGAYRRVFGNPKDYEWELLRYTDVSIPLVKTDLDCVT
KSNEVNGNSPLISKPLIDVLTPNGETMLQEKKSSSVCTATGDQLALKMSFTLPASCYATM
AIRELLKTSTSVAFHKALN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggtaacaacaaaactagtgctagtattgaatggtaggagcaggagtggcaac
caactaaaaccctgttttaattcacttttcaaccctaaaccctccttttcatcctcttcc
tgtttctatcgtttcccctccagtcagattaaaaacaacaacaataattatcaatataca
gaatcagtcaccgccatggaagaatcagacgtaggcatttgttgctacatctccccatct
ctccctggtttccgagccattctcaaacaaaggtattctgattttgtagtgaatgaagta
gatttggatggaaatattgttcatttgactgacttacatccatccactcagatagcagaa
gaagaactcgaaaaaaagcctcctgtggatcaattgaatgctaatcatgattctgatatc
gattcctttagagctcttgctggtgactctgatgccgattctctctccgactttataaat
caacttattattaataataataatagtaataataattccgacatccaagacggagccacc
tctatcgttttatctccaagttcagataaactccaccgcacggctgtgcataatttcttt
aaacaaagactcaacttcttggttactgacacagtagacggaccagacccttactcaaaa
tgcatccgtgtgaggttcaattcacggggtaaaaacgacacaacccggggttctaaaaag
cggaaaggcagaggtgacaccccttatgatagtcggggttcagatcattggccagaacat
cttggaaagtttctcaggtttcatctttgcaaggaaaacaaggatacacaggaggcgtta
ggattaatcggaaagatgcttggcattcagccaaggtcatttggattttctggtactaaa
gataagcgtgctgtaacaacacaaagggtgactgtattcaagcagcatgcacataaagtg
gctgctctaaataaaagattgataggactgaaagttggtgacttttgctatgtcaatgaa
gggcttcttcttggtcagctctgtggaaatcgattcacaatcacactaaggggcgtggtt
gcagattctgaggatactgtaaaaacagcagcagatgccttaggaaagcatggattcata
aactattttggtatgcagagatttggcagtggttctatacctactcaccttattggtgct
aaactacttaaaggagaatgggaagaagcagtgagaatgattcttgatccgagggatggt
gaaagggatgacataaggagtataagggaatattacaaagaaagtgaagacattgacggg
accttgagacaattaccccgctttctggtagctgaaaaggccatactgcagtgtttaaaa
aagtgtccaggtaactacttgcaagctctgaaggctgtacctaggacccttcgaatgatg
tacgtgcacagttaccaaagctacctgtggaaccatgctgcgagcatgagagtacagaaa
tatgggaccgaccatgtagtgcttggggatttggtctattgcaatgaagaaaattcaaat
gaaattaagcaaatcgatgattctgtatatgaagaaattgggcccaatgagtcatctgag
aatgatcatttagatgagtctgagacacatgtatctgaaggaaactgtacctcggtaaag
gttgtcaataatgaagacattgcttctgggcattacactgttactgatgttgtacttcct
ttacctggttcaagggtaaattatccacagaatgacattgaacaatattataaagatctt
gcagataaggatggtgttagcttgacagagagtgtgcataacgtcaaggagttctcacta
gccagcatgactggagcttataggcgagtatttggaaatccaaaggattatgaatgggag
ttgctgagatatacagatgtaagtatcccattggtaaagacggatttagactgtgttacc
aagtccaatgaagttaatgggaacagtccattaattagcaagccactgatagatgtgttg
acacccaatggagaaacaatgttgcaagaaaagaagtcgtcaagtgtgtgcactgctaca
ggagaccagctagccctcaaaatgagctttacgcttccagcttcatgttatgcaacaatg
gcgattagggagctgctgaaaacatcaacttctgttgcttttcacaaggcattgaattag
DBGET
integrated database retrieval system
