Erigeron canadensis (horseweed): 122588602
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Entry
122588602 CDS
T07610
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A-like
KO
K14026
SEL1 protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122588602
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Gene cluster
GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
122588602
NCBI-ProteinID:
XP_043616685
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All DBs
Position
2:complement(31277525..31284002)
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AA seq
691 aa
AA seq
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MLNRRKPPNNLIATTLLMAFFILTTTVTVTSARPFVLVLSQDDLKDGPIDDTSAITEEDP
NSVTDWDEFGESDNKSDDELDPGTWRPIFEPNNNINIEINNNENNDNDYYLVVRKLVEAV
SGGGESSVRVDDVAVEIEKMAEKSGDPNVLSLLGFLYNYGIGKEKNGGKAFMYHYFASQG
GNMQSKMALAYTYSRQELYEKAVLLYAELAEAAVNSFLISRDSPVIEPVRIHSGAEENKE
ALRKSRGEEDEDFQILEYQAQKGNSVAMYRIGIFYYFGLRGVRRDHAKALSWFSKAVDKG
EPRSMELLGEIYARGAGVKRNYTKALEWLTLASKQQLYSAYNGMGYLYVKGYGVEQKNNT
KAKEYFEKAAENEEAGGHYNLGVMYLKGIGVKKDVKLACKYFIVAANAGQPKAFYQLAKM
FHTGIGLKKNLPMATSLYKLVAERGPWSSLSRWALESYLKGEVGKAFLLYSRMAELGYEV
AQSNAAWILDKYGELSMCMGESGLCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYG
RGTERDYDRAADAYMHAKSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDSTA
KLPVMLALASLWVRRNYANSFLVDLIDSLPDVYPKVDNWIKNVVMEEGNATILTLFVCLL
TVLYLRERQRRQAVPAAGLAPPPGPNDNIIN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaccgtcgtaaaccaccgaacaacctaatcgcaacaacactattaatggccttc
ttcatcctgacaacaaccgtaacagtaacatccgcccgtccatttgtgctcgtcttatca
caagacgatctaaaagacggtccgatcgacgacacgtcagcaatcaccgaggaagacccg
aattccgtcaccgattgggacgagtttggcgaatcagataacaaatccgacgacgaatta
gatcctggcacgtggcgtcctattttcgaacctaataataatattaatatcgaaattaat
aataatgagaataatgataatgattattatttagttgttaggaagttagttgaggcggtt
agtggcggtggtgaaagtagtgtgagggttgatgacgtggcggtggagattgagaaaatg
gccgagaaaagcggtgatccaaatgtgctgtctttgttagggtttttgtataattatggg
attgggaaagagaagaatggtggtaaggcttttatgtatcattatttcgcaagtcaggga
gggaatatgcagtcgaaaatggcgttagcttatacgtattctcgacaagagctatatgag
aaagcagtattattgtatgcggagctagctgaagcagctgttaatagtttcctgatctca
agagactctccagtaattgagccagttagaattcacagtggagcagaggagaacaaagag
gctctcaggaaatccagaggggaggaagatgaggacttccagatcttggaataccaagcc
cagaaaggaaattctgtggctatgtataggattggcatattttactactttggattaaga
ggagtgaggcgtgatcatgccaaggcattgtcgtggttttcgaaggctgtggataagggt
gaacctcggtccatggagcttctcggggaaatttatgcaagaggtgccggagtcaagcgt
aactacacaaaggctcttgaatggctcaccctagcatccaaacagcaactttattcagct
tacaatgggatgggatatttatacgtcaagggttatggagtggaacaaaagaacaacaca
aaagcgaaagaatactttgagaaggccgctgaaaatgaggaagccggtggccattacaac
ttgggtgtaatgtatctcaaaggtattggggtgaagaaagatgtgaaactggcttgcaag
tatttcatagtagcagctaatgctggtcaacccaaagcattttaccagttggcgaagatg
ttccacactggtattgggctaaagaagaatcttccaatggccacatctttgtataaatta
gttgctgagaggggaccatggagttccttgtctagatgggcgttagaatcatacctaaaa
ggtgaagtggggaaggctttcctattatactcaaggatggcagagttaggatacgaggta
gcacaaagtaatgcagcctggattctcgataaatatggtgaattgagcatgtgcatgggt
gaatcggggttatgcacggatgctgagaggcatcaacgtgcacattctttatggtggcaa
gcctctgagcagggtaatgagcatgctgctttgctaattggagatgcatattattatggc
cggggtactgagagagattatgaccgtgcagcggatgcttatatgcatgcgaagtcacag
tcgaatgctcaggcaatgtttaacttgggatacatgcatgagcatggccaaggacttcct
ttggatctccatcttgccaagcgttactatgatcaagctctcgaaattgactcgactgca
aagttaccagtaatgcttgctcttgctagcttgtgggtacgaagaaactacgccaacagt
ttcttggttgatttaatagattctctaccggatgtttacccaaaagtagataactggata
aagaatgttgtgatggaagaaggaaacgcaaccattctcacccttttcgtgtgcctgttg
acagtcctttacctacgtgagcggcaacgtcggcaggcagtacctgctgcggggttggct
cctcctccagggcctaacgataacattattaattaa
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