Erigeron canadensis (horseweed): 122588645
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Entry
122588645 CDS
T07610
Name
(RefSeq) zinc finger CCCH domain-containing protein 64
KO
K24939
CWF19-like protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122588645
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122588645
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
Torus
zf-CCCH_3
zf-CCCH_10
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
122588645
NCBI-ProteinID:
XP_043616736
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All DBs
Position
2:3502355..3506031
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AA seq
585 aa
AA seq
DB search
MAPPRILLSGDPIGHLNQLFKRVSSVNKSTGPFDALLCVGQFFPESSQGLDELTEYIDGR
KNIPLPTYFIGDYGAGAVKVLSAAAKETGNQGFKMDGLKITDNLFWLKGSGKFTLHGLSV
AYLSGRKSSSGQMYGTYSQDDIDALRALAEEPGIIDIFLTNEWPSGILNRASTTDIPPGI
LDSPGGDATISELVAEIKPRYHVTGTKGVYYAREPYLNVDAVHITRFIGLAAVGNASKQK
FIHAISPTPASTMSSNEISTKPPNTTLSPYTYVEKEPEKRSSDVANDPQYWRYDVSKRQK
VGGGDTQKLCFKFISSGDCPRGDKCHFFHDMDAREQSMRGVCFEFLNKGKCERGDCNYKH
SLQEERSRSKECWFCLSSPNVESHLITSVGENCYCALAKGPLVQDHILILPIEHLPNTLS
SPQECEIEFVKFQNSLKAYFKSHKKEVVFFEWVYIKTSHANLQAIPIPLNRASALQDIFN
LAAEKLGFEFMVLKSDRSSEGRKLLRAQFNEKCSLFYVELPGGIILSHVVEENEKFPVQF
GREVLAGLLNMADRADWRNCKLSKEEEIKMVERFKNSFEEYDPNK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccaaggattctgctatctggagatcccattggccatctaaaccagcttttc
aaacgcgtctcatcggttaataaatcaactggtccttttgatgccttgttatgcgtgggc
caattttttcctgaatcttcacaagggttagatgagttaacggagtacattgacggaagg
aagaatattccgttacctacttactttattggtgattatggagctggtgccgttaaggtt
ttgtcagcagctgctaaagagactgggaatcaagggtttaaaatggatggtttgaaaatt
acagataatttattttggttgaaaggcagtggcaaattcactctccatggtttgtctgtg
gcatacttatctggtaggaaatcatcaagtggtcaaatgtatggaacatacagtcaagat
gatattgatgcactccgggccttggccgaggaacctggaatcattgacatattcctaact
aacgaatggcccagtggaatcttgaatcgagcttcaacaactgatattcctccgggaata
ttggattcgcctggtggtgatgcgacaatatctgagttagttgcagagattaagccccgg
taccatgttacaggaactaagggtgtatattatgctcgtgaaccatatctaaatgttgat
gctgtacacataacccgttttataggattagcggcagtaggaaatgcatctaaacagaaa
tttattcatgcgatttctccaactccagcatctaccatgtcttctaatgagatatctact
aaaccaccaaatactaccttatctccttatacatatgtggaaaaggaacccgaaaaaaga
tcttctgatgtggcaaatgatccacagtattggcgatacgatgtctcgaaacggcaaaaa
gttggaggcggtgacactcaaaagttgtgttttaaatttatttcttctggtgattgtcca
cgaggagataaatgccatttttttcatgatatggatgcaagggaacaatctatgaggggt
gtatgctttgagtttttgaataaaggaaaatgtgaaagaggagattgcaactataagcac
agtttgcaggaagaaagaagcaggtcaaaggaatgctggttttgtctatcaagtccaaat
gtggagtcacatttaatcacaagtgttggtgaaaattgctactgtgcgcttgctaaagga
ccactagttcaagatcatatactcatactaccgattgagcatctacccaatactctatct
tcaccccaagaatgtgagatcgagttcgttaaatttcaaaatagtcttaaagcttatttt
aagagccacaaaaaagaagttgtgttcttcgagtgggtttacataaaaacaagtcatgct
aatcttcaggctatcccgatacctttaaacagagcatctgctcttcaggatattttcaat
ttagctgctgaaaagttgggattcgagtttatggttttaaaaagtgacagaagttctgag
ggacgaaaattgctacgagctcaatttaatgaaaagtgcagtttattctatgtggaactc
cctggaggtataatattatcgcatgttgtggaagaaaacgagaaatttccagtgcagttt
ggccgtgaggttttggcaggtttgttgaatatggcagatagagcggattggcggaattgt
aagcttagcaaagaagaagaaataaaaatggtggaaagatttaaaaacagttttgaagaa
tatgatccaaataagtga
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