Erigeron canadensis (horseweed): 122588740
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Entry
122588740 CDS
T07610
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122588740
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122588740
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
RRM_10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
122588740
NCBI-ProteinID:
XP_043616849
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All DBs
Position
2:745400..749845
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AA seq
436 aa
AA seq
DB search
MTTEQPSKVIHVRNVGHEVSEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPSAVSAM
QFYANKQPTIRGRNVYVQFSSHQELTTVEQTTQGRVDEEPNRILLVTIHHMLYPITVEVL
HQVFSPHGYVEKVVTFQKSAGFQALIQFQSRQSAVAARNSLQGRNIYDGCCQLDIQFSNL
EELQVNYNNERSRDFTNPSLPSEQKGRPSQPGYGDAGASYPSQINNVAAIAAAFGGNLPP
GISGTNDRCTILASNLNPDRIDEDKLFNLFSLYGNIVRIKLLHSKPDHALVQMGDGFQAE
LAVHFLKGATLFGKRLEVNYSKYPNITMGPETHEYLNSNLNRFNRNAAKNYRYCCSPTKM
IHLSTLPQDVTEEEIVSHLEEHGSIVNSKVFEMNGKKQALVLFENEEQATEALVCKHATP
LADSMIRISFSQLQTI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgagcagccttccaaagtcattcacgttcggaatgttggtcatgaggtttca
gagcctgacctgcttcagctattccagccttttggagtcatcaacaagctagtcatgctt
cgtgcaaaaaaccaggcgctccttcaaatgcaagatgttccttccgctgtcagtgccatg
caattctatgccaataagcaaccaaccataaggggaagaaatgtttatgttcagttctca
tctcatcaggagttgactactgtggagcaaactactcaaggacgggttgacgaggagcct
aatcgtattctcttggtcaccattcatcatatgctgtaccctataacggtggaagtgttg
catcaagtcttctctcctcatggatatgtggagaaggtcgtcacatttcaaaagtcagct
ggttttcaagcacttattcaatttcaatcacgacaaagtgccgtggctgcaagaaattcc
cttcaggggcgtaacatatatgatggttgctgtcaactagatattcagttctccaatctt
gaagagttgcaagtgaactacaataatgagcggtctagggatttcacaaacccgtcgcta
ccttcggagcagaagggcagaccctcccaacctggatacggagatgccggagctagttat
ccttcgcagataaacaatgttgctgcaattgcggctgcttttggaggaaatctacctcct
ggaattagtgggacgaacgacaggtgcactattcttgcatctaatctgaatcctgatagg
atagatgaggacaagttgttcaacttgttctctttatacggaaacattgttagaatcaaa
cttctccacagcaaaccagatcatgcgcttgttcagatgggtgatggctttcaagctgag
ttagctgtgcactttttgaagggagctacactatttgggaaaaggttggaggttaattat
tcaaagtatccaaatataacaatgggtcctgaaacacacgagtacttgaactcgaacctg
aacaggttcaacaggaatgctgctaaaaactaccgctactgttgctcaccgacaaagatg
atacatctgtcaaccctaccacaggatgtgacagaagaggagattgtatcccatcttgaa
gaacatgggagtattgtgaactcaaaagtgtttgaaatgaatggtaagaagcaggcactt
gtgttgttcgagaatgaggaacaggcgactgaagctcttgtgtgcaaacatgcaactcct
cttgcagattccatgattcgtatctccttttctcagctgcagacaatttga
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