Erigeron canadensis (horseweed): 122588816
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Entry
122588816 CDS
T07610
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122588816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122588816
03036 Chromosome and associated proteins [BR:
ecad03036
]
122588816
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122588816
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122588816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SCAP
Beta-prop_WDR75_1st
Ge1_WD40
RMC1_N
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_RIG_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
122588816
NCBI-ProteinID:
XP_043616959
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All DBs
Position
2:complement(30410499..30413395)
Genome browser
AA seq
455 aa
AA seq
DB search
MAAGSFVTSSGTKSQSRCPLQEQYLQRRNSRENLDRFIPNRSAMDFDYAHYMLTEAKKGK
ENPVNCSPSREAYRKLLAETFNMNRTRILAFKNKPPTPTEAIPSDCFSSVQQSKPVKARR
YIPQTSERTLDAPDIIDDYYLNLLDWGSSNVLAIALGTTVYLWDATDGNTSELVTVDDEI
GPVTSVKWAPDGRHLSVGLNNADVQLWDSTANRLLRTIRGGHQSRVGALDWNNHILTTGG
MDGRIVNNDVRIRSPIVETYTGHHQEVCGLKWSASGQQLASGGNDNLLHIWDKSMASTNS
PTEYLHRLEDHTAAVKALAWCPFQANLLASGGGGGDKCIKFWNTHTGSCLNSVDTGSQVC
ALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGCTVASAAG
DETLRFWNVFGSPAVAAKAAPKATPEPFANVSRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggatcttttgttacttcttcaggtaccaaatcgcaatctcgatgccccctt
caagaacaataccttcaacgtcgcaattctcgcgaaaacttggataggttcataccgaat
agatcagctatggatttcgattatgcacattacatgttaacggaagcgaaaaaaggcaag
gaaaacccagtgaactgctcgccgtccagggaagcgtacaggaagcttttggcggaaacc
ttcaacatgaacagaaccaggattcttgctttcaagaacaagccaccgacgcccactgaa
gcgattcctagcgattgcttttcttctgttcagcaatcgaaacctgtgaaagcgaggaga
tacattccgcagacttcggaaagaacattggatgcaccagatattatagatgattattac
ttgaatctgttggattggggaagcagcaatgttcttgcaattgctcttggaacaacagtg
tatctgtgggatgctactgatggtaatacatcagagcttgtgactgtagatgatgagatt
ggcccagtgactagtgtcaaatgggcacctgatggacgtcacctttcagtcggtctaaac
aacgcagatgtccagctttgggattcgactgctaatagattgttgagaaccatcagagga
ggtcaccaatctcgggttggtgcattagactggaacaaccacattctgactacaggagga
atggacggacggattgtaaacaatgatgttaggatcagatcacccatagttgaaacatac
actggccaccaccaagaagtttgcggcttgaagtggtcagcctctggtcagcaattagcc
agtggtggaaacgacaatcttcttcacatttgggacaaatccatggcgtctacaaattcc
ccaactgaatatcttcacaggctcgaggatcacactgcagcagtgaaagcccttgcttgg
tgcccattccaagctaatcttttggcttctggaggtggtggtggtgacaagtgtatcaag
ttttggaacacacacactggttcttgcttgaattcagtggacacagggtcacaagtatgt
gcacttttatggaataagaacgaacgtgaactgctgagctcacatgggtttacacagaac
cagctgacattatggaagtacccttcaatggttaagatggctgagcttactggccatact
tcaagagttcttttcatggcacagagcccagatggatgtacagttgcatctgctgcagga
gacgagacattgagattctggaacgtttttgggagccctgcagtggctgctaaagctgca
cctaaagctacaccggaaccatttgcaaatgtgagccgtattcgttag
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