Erigeron canadensis (horseweed): 122588841
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Entry
122588841 CDS
T07610
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122588841
Chaperones and folding catalysts [BR:
ecad03110
]
Heat shock proteins
HSP100
122588841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
AAA_14
nSTAND3
AAA_7
AAA_18
IstB_IS21
bpMoxR
ATPase_2
AAA_28
RuvB_N
TniB
RNA_helicase
TsaE
NACHT
NBD_SMAX1
AAA_25
DUF815
Zeta_toxin
Mg_chelatase
AAA_24
AAA_33
DNA_pol3_delta2
Roc
T2SSE
AAA_19
ABC_tran
ResIII
DUF87
DUF2987
Spectrin_Anc-1
AAA_13
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
122588841
NCBI-ProteinID:
XP_043616988
LinkDB
All DBs
Position
2:complement(41022695..41026739)
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AA seq
912 aa
AA seq
DB search
MNPDKFTHKTNEAFVASHELAVNAGHAQFTPLHLAVALISDPNGIFKQAISNAGGEESAN
SAERVFNQALKKLPSQSPAPDEVPASTSLTKAIRRAQTLQKKRGDTHLAVDQLVLSLLED
SQISDLLKEAGVGALRVKNEVEKLRGKEGKKVESASGDTNFQALKTYGRDLVEQAGKLDP
VIGRDDEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRILRGDVPSNLAEVRVVA
LDMGALIAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVLVAEPSVPDTINILRGLKERYEG
HHGVRILDRALVVAAQLSNRYITARFLPDKAIDLMDEACANVRVQLDSQPEEIDNLERKK
MQLEVELHALEKEKDKASKARVVEVSKELEELREKLQPLMMKYRKEKERTDEIRRLKQKR
EELMVALQDAERRGDIVRAADLKYGAFQEVETAIAKIEGTADENVMLTETVGPEQIAEVV
SRWTGIPVTRLGTNEKERLIGLAERLHRRVVGQDQAVSAVAEAVLRSRAGLGRAQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDEKLMIRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHNSVFNTLLQMLDDGRLTDGQGRTVDFTNSVIIMTSNL
GAEHLLQGLSGKMTMDSARAMVMQEVRRHFKPELLNRLDEIVVFDPLSHDQLRKVARLQL
KDVAVRLADRGVALGVTEAALDVILRESYDPVYGARPIRRWLERRVVTELSKMLIAEEID
ENSTVYIDADMNGEELSYRVERNAGLVNAATGQKSDILIEVPTSNGGVRSDAAQAVKRMK
IEEVDDEDEMAD
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacaaatttacacacaagacaaatgaagcatttgtcgcaagtcacgaactt
gctgtaaatgctggacacgcacagttcacgcctctgcatctagcagtcgctttgatctct
gatcctaacggcatttttaaacaagcgataagcaatgcgggtggtgaagaatcagctaat
tcggctgaaagggtgtttaaccaagcattaaagaaactcccatcacaatcccctgcacct
gatgaagttccagctagcacgtctctgacgaaagccattcgtcgtgctcagacgttgcag
aagaaacgcggtgacacccatttggcggtggatcagttggttttgagcttgctcgaggat
tcgcagattagcgatttgttaaaagaagctggggttggtgcattgcgggttaagaatgag
gttgaaaagttaagagggaaagaggggaagaaagtggaaagtgcttctggagatacgaat
ttccaagcgcttaagacgtatgggcgtgatcttgttgagcaggcagggaagcttgatcct
gtgatcgggcgagatgatgagatcaggagagtgattaggattttatcgagacgaactaag
aacaaccctgtacttattggagagccaggtgtagggaaaactgcggttgttgaaggattg
gctcagaggattttgagaggtgatgtacccagtaatcttgctgaggtaagagtcgtggcg
ttggatatgggggctttaattgctggagccaagtatagaggggagtttgaggaaagattg
aaagcggttttgaaagaagtggaagaggccgaagggaaggtgatattgtttattgatgag
attcatcttgttcttggggcgggtcgaactgaagggtcaatggatgctgcaaatcttttt
aagcctatgcttgctagaggtcaacttaggtgcattggtgcaactactttggaagagtac
aggaagtatgttgagaaagacgctgcgtttgagaggcgttttcaacaggttttggtggct
gaacctagtgttcctgatactattaacattcttagagggttgaaagaaagatatgaaggt
caccatggtgttcggattcttgatcgtgctcttgtggttgcagctcagctttcaaaccga
tacataacagctcgattcctgcccgataaggctattgaccttatggatgaagcatgtgcc
aatgtgagggtacaacttgatagtcagcctgaggaaattgataatcttgagaggaagaaa
atgcagttagaggttgagcttcatgccttggagaaggaaaaagacaaggcaagcaaagct
cgtgttgttgaagtgagtaaggagcttgaagaactgagagaaaaactccaaccactaatg
atgaagtacaggaaggaaaaagagcgaacagatgaaattcgcaggttgaaacagaaaagg
gaggagcttatggtggcgctacaagatgcagaaagaagaggtgatattgtcagagctgca
gacctgaaatatggtgcatttcaagaagtggagactgctattgcaaagattgaagggact
gcagatgaaaatgtgatgttgaccgagaccgtgggacctgaacagattgctgaggttgtg
agccggtggactggtataccggtaactagactaggcactaacgagaaggagaggcttatt
gggctagctgaaaggttgcatcgacgagtggtaggccaagatcaagcagtctctgctgtg
gctgaggctgttttgagatctcgagctggtttgggaagggctcagcagccaactggttca
ttcctcttcttgggtcccaccggtgttgggaaaactgagcttgctaaggctctagcagag
cagttatttgacgatgagaagctaatgattaggattgatatgtccgagtacatggagcaa
cactcggtggccagactaataggtgctccacctggctatgttggtcatgaagaaggtggt
cagctcactgaagctgtgaggagaagaccttatagtgttgtgctgttcgatgaagtggag
aaagctcataattctgtttttaacacactgcttcaaatgcttgatgatggacggttgaca
gacggtcaaggccgtactgtggatttcaccaattctgttatcattatgacttccaacctt
ggagctgaacatctgttacaggggttgtctgggaagatgacaatggacagtgctcgtgca
atggtaatgcaagaggtgaggaggcacttcaaacccgagcttctgaacaggcttgatgag
attgtggtttttgatccgctttctcatgaccagttaaggaaagttgccaggctccagttg
aaagatgtggcagtccgtcttgctgacaggggagttgccttgggagttacagaggcggct
ttggatgttatactccgtgagagttatgacccggtatatggtgcacggccaattaggaga
tggctggaaagaagggtggtgacagagttatcaaagatgttgattgcagaagagattgat
gaaaattcaacagtgtacattgatgctgacatgaatggggaagagttgagttaccgggtg
gagaggaatgctggacttgttaatgccgcgaccgggcagaaatcagatatactgatagaa
gttcctacttcaaatggaggggttcgtagtgatgctgcacaagctgtgaagaggatgaag
atcgaggaagtggatgatgaggatgaaatggctgactaa
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