Erigeron canadensis (horseweed): 122588862
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Entry
122588862 CDS
T07610
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00531
Glycosaminoglycan degradation
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122588862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecad00536
]
122588862
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122588862
Glycosaminoglycan binding proteins [BR:
ecad00536
]
Heparan sulfate / Heparin
Enzymes
122588862
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122588862
NCBI-ProteinID:
XP_043617013
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All DBs
Position
2:complement(41113868..41118466)
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AA seq
542 aa
AA seq
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MEFCTTLFTFLVSISVILARNVEEAHLIINGSLPITHTDANYICATIDWWPSNKCDYHQC
PWGSSSALNLDLSHPFLVKAVQAFERLRIRVGGSLQDQVLYDVRSFSGPCHPFIKMKGGL
FGFSKGCLNMSRWDELNHFFLETRALVTVGLNALYGRHQIKKGVWGGDWNSSNARDFIKY
TVSKGYQIDSWEFGNELSGKGIGAMVDAKQYGSDVLQLRDIIDDSYKKFKPKPLLVAPGG
FFDKQWYAKLLKVSGSEIVNVMTHHMYNLGAGVDPTLVEKILDPHVLNRASVTFNDLRET
IQTNGPWASAWIGESGGAFNSGGLHVSDSFVDSFWYLDQLGMAAKYHTKVYCRQTLIGGN
YGLLNKTTFMPNPDYYSALLWHRLMGRGVLAVDRRNIAPHLRTYAHCSKGKTGITLLLIN
LSNQTDFKLDVYNILNMNLRTSQHKTSEKKTSFAHGLKTTVSCIGTKSTDENLSREEYHL
TPQDGDIRSKTMLLNGVPLKLTEIGDILSFRPAMVKVNTPISITPLSIKFLQFPNFDAPG
CI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagttttgcactacattgtttacatttctagtgtcgatttctgtaatattggcgcgg
aatgttgaagaagcgcatcttattattaatgggagtttaccaataacacatacggatgca
aattatatctgcgctactatagattggtggccaagcaataagtgtgattatcatcaatgc
ccatggggatcttcgtctgctttaaatctggatttatcacatccttttctagtcaaagca
gtgcaagcttttgaacgattgagaatacgagtgggaggttccttacaagaccaagtatta
tatgacgtacgtagtttctcgggtccatgccacccatttataaaaatgaaagggggactg
tttgggttctccaaaggatgtcttaatatgagtagatgggatgaactgaatcatttcttc
ttagaaacaagagcacttgtgacagttggcttgaatgcactatacgggagacaccagatt
aaaaagggcgtttggggaggagattggaattccagcaatgctcgcgatttcataaagtat
actgtatccaaagggtatcagatagactcatgggagtttggtaacgagttaagtggtaag
gggattggtgcgatggtggatgctaagcagtatgggagcgatgtacttcaactcagggat
ataattgatgattcatacaagaaattcaagccaaaaccattactcgtggcaccaggaggg
ttctttgataaacaatggtatgctaagcttcttaaagtttcagggtcggaaattgtcaat
gtcatgacgcaccacatgtacaatctaggagcaggtgttgatccaactttggtagaaaag
atactagatccccatgttttaaatcgtgcatctgtcacatttaatgatcttcgagaaacc
attcaaacaaatggcccatgggcatctgcttggattggggaatctggcggggccttcaac
agtggtggtcttcatgtttcagactcttttgtagatagcttctggtacttggatcagctt
ggaatggcagcgaagtatcacacgaaagtatattgccgacaaaccttaattggcggaaac
tacggtcttctgaacaaaacgacgttcatgcctaaccctgactactacagtgcacttctt
tggcatcgacttatgggcagaggagttcttgctgttgatagaagaaacattgcgccacat
ttgcgcacttacgctcattgttcaaaagggaaaacgggtataactttgcttctgatcaat
ctaagcaatcagactgatttcaaacttgatgtttacaacatcctgaacatgaatctccgt
acaagtcagcacaaaacctcggaaaagaaaacatcatttgctcatggtctcaagacaaca
gtctcatgcattggaacgaaatcgacagatgaaaacttatctagagaggagtaccactta
acaccacaagacggtgatattcgaagtaaaacaatgcttctaaatggagttccattaaag
ttgacagaaatcggagacatcctaagtttcagaccagctatggtgaaggtgaatacccca
atttccatcactcctttgtccataaagtttttgcagtttccaaactttgatgcgcccggt
tgtatatga
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