Erigeron canadensis (horseweed): 122589033
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Entry
122589033 CDS
T07610
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122589033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122589033
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
122589033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_21
AAA_29
AAA_30
AAA_16
Zeta_toxin
AAA_5
AAA_15
AAA_25
AAA_28
Motif
Other DBs
NCBI-GeneID:
122589033
NCBI-ProteinID:
XP_043617205
LinkDB
All DBs
Position
2:complement(29131881..29139101)
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AA seq
705 aa
AA seq
DB search
MASLPLSLPLTTTHHRHHLPIHRRPPPSLRHHHHQQLHLTQTHTKNTFIPTAYITGPASD
AIIASDDPNIEPDSASEPVQRFNAVNLGLLLKLISQHKLRVFACIFSLICCTTCTLSMPI
LSGRFFEVLIGARSEPLWQLLSKVAVLYTLEPIFTVIFVVNMNTIWEKVMSSLRAQIFGS
VLIHKVEFFDKYKVGELTALLTSDLGSFKNIVSENISRDRGFRALTEVVGTMCLLFVLAP
QLAPILGALMLGVSILVAVYKRSTVKVFKAYGLTQALIADCITETFSAIRTVRSFGGEKR
QMLTFGNQVLEYQKSGIKLGVFKSINESITRVAVYVSLLALYILGGNKVKAGELSVGTVA
SFIGYTFTLTFAVQGLVNTIGDLRGAFAATERINSILSDSEIDQALAYGLEKDIKQIGTY
NDLEMFFINDPNDKRRSQNMRYMSSLTTASSVRNLAISGDICLEDVHFAYPLRPDVEVLS
GLDLTLKCGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVAGEDLRTFDKSEWARVVS
IVNQEPVLFSVSVGENIAYGLPDENVSRDDVIAAAKAANAHDFIISLPEGYDTLVGERGG
LLSGGQRQRVAIARALLKNAPILILDEATSALDTVSERLVQDALNHLMKGRTTLVIAHRL
STVQNADQIALCSEGKIKELGTHLELLAKKGLYDSLVGTQRLAFE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctcccactttccctcccactcaccaccactcaccaccgtcaccacctcccc
atccaccgccgtccaccgccgtccctccgtcaccaccaccaccaacaacttcacctaact
caaacacacactaaaaacacctttatccccacagcttacataaccggtccagcatcagat
gcgataatcgcctctgatgatcccaatatcgaaccggattccgcttccgaaccggtccaa
cggtttaatgccgtaaatttaggactgttattgaaactcatttctcaacataaattaaga
gtttttgcttgtatttttagccttatttgttgcactacttgtactctctctatgcctatt
ttatccggaaggttttttgaggtactaataggtgcaagatcggaacctttatggcagctt
ctcagcaaggttgcagttctatacacattggagccaatctttactgttatttttgtagta
aatatgaacacaatatgggagaaggttatgtcgagcttaagagctcaaatatttggcagt
gtattgattcacaaggtggagttctttgacaaatacaaggttggcgaactcactgcctta
ttgacatctgatttgggttcattcaaaaacattgtgagtgagaatatttcaagggatcgt
ggtttcagggcactaaccgaggttgttgggacaatgtgcttgctatttgtgctggccccc
caacttgcaccaattttgggtgcgcttatgcttggagtgtctattttagttgcggtatac
aagagatcaactgtgaaagttttcaaagcctatgggttgacccaagctttaatagctgat
tgcataactgaaactttttctgcgatccgtacagtaagatcatttggtggagaaaaacgc
caaatgttaacgtttggtaaccaggttctcgagtatcagaaaagtggcatcaaacttgga
gtttttaagtctattaatgaatcaataactagagtggcagtgtatgtatctttactggcc
ctttatattcttggaggaaacaaagttaaggcgggtgagctatcagtgggaactgttgct
tcttttatcggatacacgttcactttgacctttgctgttcaaggactggttaacactatt
ggggatttgaggggggcttttgctgctacggagagaattaactctatcttatctgactct
gaaatcgatcaagcactagcttatggattggaaaaagacatcaagcaaataggaacatat
aatgacctagaaatgtttttcataaacgaccccaatgataaaaggagatctcaaaacatg
aggtatatgtcatctttaacaacagccagcagtgttcgcaatcttgcaatctcaggggat
atatgtcttgaagatgtgcactttgcatatcccttgaggcctgatgtagaggtccttagt
ggtcttgatttgacactaaaatgtggaaccgtcacggctctagtgggctcaagtggagct
ggtaagagtaccattgtacagcttttggcacgattttatgagccaactcaaggtagaata
acagtggcaggcgaggatttgagaacatttgataagagtgaatgggcccgtgtagtctcc
atagtcaatcaggagcctgttcttttctctgtttctgtgggagaaaacattgcatatggg
cttccggatgaaaacgtgtcacgggatgatgttatagcagcagcgaaagctgccaatgct
catgattttattatatcactcccagaggggtacgatacacttgttggtgaaagaggaggt
ttacttagcggaggtcaaagacagagagttgctattgcgagggctctactaaaaaatgct
cctattttgatacttgatgaggctaccagtgctttagatacagtgagcgagcggttagtc
caggatgctcttaaccatctgatgaagggaagaacgacattggtgattgcacacagatta
agcacggttcaaaatgcagatcagattgctctgtgttctgagggcaaaatcaaagaactg
ggcactcacttagagttattggctaagaagggcctctatgactctcttgttggcacacaa
aggcttgcatttgagtga
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