Erigeron canadensis (horseweed): 122589036
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Entry
122589036 CDS
T07610
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122589036
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122589036
Glycosyltransferases [BR:
ecad01003
]
Polysaccharide
Structural polysaccharide
122589036
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122589036
NCBI-ProteinID:
XP_043617208
LinkDB
All DBs
Position
2:complement(40765459..40768759)
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AA seq
525 aa
AA seq
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MYEKKMCCRVEQNKKRFGIGEMGLRKLSEIRVEKLKNSARSPKIKMWAIRGISSVLIWTF
LVQLSAIGSGGGGGGDGGNSNWGRRALSCFGQDSSVSSAALDVKFLPNVPAKVLPPKRVY
KNNGYLVVSCNGGLNQMRSAICDMVAIARYLNVTLIVPELDKTSFWADPSDFEDIFDVDH
FITSLRDEVRVLKQLPPRLKKRVELGIVHTMPPISWSDISYYHNQILPLIQKYKVVHLNR
TDARLANNGQPLELQKLRCRVNFGALRFTTQIEELGRRVVKLLRQNGPFLVLHLRYEMDM
LAFSGCTQGCNVEEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDI
DRDIQIYIAAGEIYGGKRRMDSLTDVYPKVVRKETLLGADDLQYFQNHSSQMAALDYLVS
LESDIFVPTYDGNMAKVVEGHRRFLGFKKTILLDRRVLVELIDKYTSGSLSWDDFSSAVK
ETHAQRMGNPTKRLVISDRPKEEDYFYANPEECLQPSDDEPMSIL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaagaaaatgtgttgtagagttgaacagaataaaaaaagatttggaattggg
gaaatgggattaaggaaattaagtgaaattagagtcgagaaattaaagaattctgcaaga
tcaccgaaaattaagatgtgggcaattagagggattagtagtgtgttaatatggacattt
ttggttcaattaagtgcaataggaagcggtggtggtggtggtggtgatggaggaaatagt
aattggggtcgtagggctctatcgtgtttcgggcaagattcttcagtttcttcggctgct
ttagatgttaagtttttgcctaatgttcctgctaaagttcttccacccaagagggtatac
aagaataatggttacttggtggtgtcatgtaatggaggacttaatcaaatgcgttctgct
atttgtgatatggtggcaatagctagatatttaaatgtgactcttatagttcccgagttg
gataaaacttctttttgggctgatccaagtgactttgaagacatatttgatgttgatcat
ttcattacttccttgagagatgaagtccgggtgcttaaacagcttcctcctaggcttaaa
aagagagttgaattaggaattgtgcacaccatgcctcccattagctggtctgatatttct
tactatcataaccagattcttcctttgattcaaaaatacaaagttgtgcatttgaataga
actgatgcccgccttgcgaataatggtcaaccacttgaacttcagaagcttagatgccga
gtaaattttggtgctttgagatttacaactcaaatagaagagctgggcagacgtgttgtt
aaactattgagacaaaacgggccttttctagtgcttcatcttcgatatgaaatggatatg
ttagcattttctggctgtacgcaaggatgtaatgttgaagaggtggaagagttgaccaga
atgagatatgcttacccatggtggaaggaaaagattattaattctgatttgaagcggaaa
gacggtttatgccctttgactcctgaggaaacagcccttacacttagagcactggatatt
gaccgggacatccagatttacattgcggctggtgaaatatatggtggaaaaagaagaatg
gatagccttacagacgtgtatccaaaagtggtaagaaaggagactctgttaggggcagat
gaccttcagtatttccagaatcattcatcacaaatggcagcattggactatcttgtgtca
ttggagagtgacatttttgtgcctacttatgacggaaatatggccaaagttgtagaaggc
catcgcagatttttgggtttcaagaagacgatactgctagataggagagttctggttgaa
ttaattgacaaatacacaagtgggtcgttgagttgggatgatttctcgagtgctgtgaag
gaaacacatgcacaacgtatgggaaaccccacaaaaagattggtcatttcggatagacca
aaagaagaagattacttttatgccaatccagaggagtgtttgcagccatcagacgatgaa
cccatgagcatcctataa
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