Erigeron canadensis (horseweed): 122589122
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Entry
122589122 CDS
T07610
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122589122
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122589122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
122589122
NCBI-ProteinID:
XP_043617302
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Position
2:27377924..27381143
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AA seq
370 aa
AA seq
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METELIELFETAKKAADAAAAVGGGGAAEEDRCVDALNVLKKFPVNYQILVSTQVGKRLR
QLAKHPRKKIQSLASELVEIWKSIIVEETLKSKKNGNLDIKESPKSEPEQEMSEKKFRRN
FSTKVSKTEGIKVEKNGHSVTPTSERKINVVKTEKKTTTTDNVVIAEKISTTNDNAKVEK
KSSPNNVAPPKLTSLVYCNDALRDKIRELLAEALCKVAGEAGEESRDTVAACDPYRVAVS
VESAMFEKWGRSNGAQKFKYRSIMFNVKDPKNPDFRRKLLLGDVKPERIVELTPEEMAST
ERQLQNVKIKEKALFECERGGPPKATTDQFRCGRCGKRKCTYYQLQTRSADEPMTTFVTC
VNCDNHWKFC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagacggagctaattgagttatttgaaacggcgaagaaagccgcggatgctgcggcg
gcggttggtggtggtggcgcggcggaagaagatcggtgtgttgatgctttgaatgtgctt
aagaaatttcctgtcaattatcaaattcttgtttctacacaggtggggaaacgtcttcgc
caattagcaaaacatccaagaaagaagatacagtcgctcgcttctgaattagttgagatt
tggaaaagcataattgttgaggaaactttaaagagcaagaaaaatggcaacttggacatc
aaggaatctccaaaatccgagccagaacaagagatgtccgagaagaaatttcggaggaac
ttttccaccaaggtttcaaagacagagggtataaaagtagagaaaaatggtcatagtgtc
acacctacttctgaaagaaagataaatgttgtcaagaccgaaaagaaaactacaacaact
gataatgttgtcattgccgaaaagatttctacaacaaacgataatgccaaggttgaaaag
aaatccagcccaaacaatgttgctcccccaaagctgacttcgcttgtttactgcaatgat
gctcttcgcgacaagattcgtgaacttcttgcagaagcattatgcaaagttgctggggag
gctggggaggaatcaagggatacggtggctgcctgtgacccttatagggttgctgtgtct
gtggaatctgcaatgtttgaaaaatggggtagatccaacggggcgcagaaattcaaatac
agatccattatgttcaatgttaaggatccgaaaaatccagatttcagaaggaaattactt
cttggggatgtgaagccagagagaattgtggagttgacacctgaagaaatggctagcact
gaaaggcaattgcagaatgtgaaaataaaagagaaggctttatttgaatgtgaacgtggg
ggtccaccaaaagccactactgatcaattcagatgtggtcggtgtggtaaaaggaagtgc
acttattatcagttgcaaactcggagtgctgatgaacctatgacaacgtttgtcacatgt
gtgaactgtgataatcattggaagttctgttaa
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