Erigeron canadensis (horseweed): 122589159
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Entry
122589159 CDS
T07610
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122589159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122589159
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122589159
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122589159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
ANAPC4_WD40
NBCH_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD_LRWD1
TPR_GEMI5
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
122589159
NCBI-ProteinID:
XP_043617342
LinkDB
All DBs
Position
2:complement(45053722..45065404)
Genome browser
AA seq
918 aa
AA seq
DB search
MPLRLEIKRKLAIRSERVKSVDLHPTEPWILASLYSGTVGIWDYQTQAQVKSFEVTDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVYEAHADYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKNWFCTQIFEGHSHYVMQVTINPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKTCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWTVGYMKSSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIRSVGADNEVSDGERLPLAIKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSTDGEYAVRESTSKIKIFNKSFQ
EKKSIRPTFSAERIFGGSLLAMCSSDFICFYEWAECRLIQRIDVNVKNIFWADSGDIVAI
ASDSSFYILKYNRDVVSAHLDNGRSVDEQGIEDSFEILYEVNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVGYTLLLTLIEYKTLVM
RGDLERARGLLPSIPVEHHNSVAHFLESRGMTEDALEVATDPDYKFELALQLGKLDIAKD
IALVAQSESKWKQLGELAMSTGMLDMAEDCLKHANDLSGLLLLYSSLGDAEEIAKLASLA
KENGKNNVAFACLFMLGKLEDCLQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLNK
VNPKAAESLADPEEYPNMFEDWQLALEVEARASDKRGHYPPAAEYVNYVDRSHINLVEAF
KHMQLDVEEPRENGGLVHEGVENDDKEDKLVDGQEEDQVGGQKDQQGCQKDDQDVDAARD
NDSSDGAVLIDSHEYDEE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactagagattaagaggaaacttgctataagatcagagagagttaaatcc
gtcgacctccatccgaccgagccatggatattagcaagtttgtactcgggaactgtcgga
atatgggattaccagacccaggctcaggtaaaatctttcgaggtcaccgacttaccagtc
agatcagcaaagtttatagcgcgcaagcagtgggttgttgctggtgcagatgatatgttt
atccgggtatacaattacaatacaatggataaagtgaaagtatatgaggcacatgctgat
tatatccggtgtgtggctgttcatcctacgttgccatatgtattgtcatcatctgatgac
atgcttataaagctttgggactgggagaagaattggttttgtactcaaatttttgagggt
cactctcattatgttatgcaagtgacaatcaatcccaaggacactaatactttcgcaagt
gcatcgcttgatcgaactataaagatttggaatctgggttcacctgatcctaatttcaca
ctggatgcccatcttaaaggagtgaattgtgtggattattttactggtggtgataaacct
tatctaattactggatcagatgatcacactgccaaggtgtgggattatcaaactaaaact
tgtgttcagactctagaaggtcacacccataatgtttctgctgtatgtttccatccagag
ctcccaattattattacaggttccgaggatggtactgtacgtatatggcattcaactact
tacagacttgagaacacattgaactatggacttgaaagggtttggactgttggatatatg
aaaagttcacgtcggatcgttattggctatgacgaagggacaataatggttaaaattgga
cgagaagaacctgtagcgagtatggacaatagtgggaaaataatatgggccaagcataat
gaaattcagactgttaacattcgaagtgtgggagctgataatgaggtatctgatggagag
aggctacctttagcaattaaagagctgggaacgtgtgatctgtaccctcaaagcttaaag
cacaacccgaatgggaggttcgtcgttgtctgtggtgatggtgaatacatcatatataca
gctttggcatggagaaatcgatcctttggatctgcgttggagatcgtctggtctaccgat
ggtgaatatgctgtaagggaaagtacatccaagatcaagattttcaacaaatcttttcag
gaaaagaagagtattaggccgactttttccgctgaacgaatatttggtggatctttgctg
gctatgtgttcaagtgactttatatgtttctatgaatgggctgagtgtagattgattcaa
cggattgatgtcaatgtcaaaaacattttctgggctgatagtggtgatattgtggcaatt
gctagtgattcatcgttctacattctaaagtacaatcgggatgtagtgtcggcgcatctc
gataacggaagatctgtagatgagcaaggtattgaggattcctttgaaattctctatgaa
gtaaacgaaagagttagaactggattatgggtcggggactgttttatttacaataattct
tcatggaggctcaactattgtgttggtggcgaggtaaccaccatgtttcatttggaccgg
ccaatgtatcttttaggatatttggctaatcagagcagggtttatctcattgacaaagaa
tttaatgtcgttggctacaccttgcttctcactttgattgaatacaagacactcgtgatg
cgtggagaccttgaacgagccaggggacttttgccatcaattccagtggagcatcataat
agcgttgctcatttcttggaatcacgagggatgactgaagatgccttagaagttgctact
gatcctgactataaatttgagctggcccttcagcttggtaaactagatatcgcaaaggat
attgcactagtagctcagagtgagtcaaagtggaagcagttgggtgaactggctatgtca
accggaatgttggatatggccgaagattgtttaaagcatgcaaatgatttgagtgggttg
ttattactctattcttctttaggagatgcggaagagattgcaaaacttgcatctctagca
aaagagaatggaaaaaataatgttgcatttgcttgtctgtttatgttgggtaaattggaa
gactgcttgcagttgctggttgacagcaataggattcccgaagctgctttgatggcacga
tcttaccttccaagcaaggtttcagaaatagtggccctttggagaaaagaccttaacaag
gttaacccgaaggctgcagaatctttagcagatcctgaagagtaccccaatatgtttgag
gactggcaacttgccctagaggttgaagcaagagcttcagataaaagggggcattaccct
ccagcagcggaatatgttaactatgttgatagatctcatatcaacctagttgaagctttt
aaacacatgcaattggatgttgaggagccacgtgaaaatggagggttggtacatgagggt
gtagaaaacgatgacaaggaggataaattggttgatggtcaagaagaggatcaagttggc
ggtcaaaaggaccaacaagggtgtcaaaaggatgaccaagatgtagatgcagccagggat
aatgattcttcagatggtgccgtactcattgatagtcatgaatatgatgaagagtga
DBGET
integrated database retrieval system
