Erigeron canadensis (horseweed): 122589173
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Entry
122589173 CDS
T07610
Name
(RefSeq) vacuolar protein sorting-associated protein 60.2-like
KO
K12198
charged multivesicular body protein 5
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122589173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122589173
Membrane trafficking [BR:
ecad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
122589173
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Prefoldin
Fib_alpha
DUF1319
CCDC160
Motif
Other DBs
NCBI-GeneID:
122589173
NCBI-ProteinID:
XP_043617359
LinkDB
All DBs
Position
2:32120588..32125155
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AA seq
237 aa
AA seq
DB search
MKRVFGINKKDKEPPPSINEASDRINKRGESVDEKIKRLDGELARYKEQIKRTRPGPAQE
AVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGM
MKAVKIQEIDNLQDDMADLMDVSNEIQESLGRNYNVPDDIDEEDLMGELDALEADMGLET
ESEGVPSYLQPDNVTDFNDELNLPSAPSGHALPARKVSNQAEDEFGLPPVPRASLRG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagtatttggcattaacaagaaagataaagaacctcctccttccatcaatgaa
gcttctgatcggatcaataaaagaggagagtcggtggatgagaaaattaagcgacttgat
ggggaacttgccagatataaagaacagatcaaaagaacccgtcctggccctgctcaagaa
gctgtgaaagctcgggcgatgagagttctcaagcagaaaagaatgtacgaaggacaacgt
gacatgctatacaaccaaactttcaatctagatcaagtggcatttgcttcagagggtatc
aaagatgctcaacaaacaatgtcagctcttaaatcagcaaacaaagagttgaaaggaatg
atgaaggccgtcaagatccaagaaatcgacaatttacaagatgacatggcggacttgatg
gatgttagcaatgaaatacaagaatctcttggtagaaactacaatgtgcctgatgacatt
gatgaagaagatctcatgggtgaacttgatgctctggaggcagatatgggacttgaaact
gaaagtgaaggggtaccttcatatcttcaacctgataatgtaaccgatttcaatgatgaa
ctcaatttgccttcagctcccagtgggcatgcattaccggctcgaaaggttagcaatcag
gcggaagatgaatttggtttaccaccagtcccccgtgcatctctacgtggttag
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