KEGG   Erigeron canadensis (horseweed): 122589256
Entry
122589256         CDS       T07610                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03030  DNA replication
ecad03410  Base excision repair
ecad03420  Nucleotide excision repair
ecad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122589256
   03410 Base excision repair
    122589256
   03420 Nucleotide excision repair
    122589256
   03430 Mismatch repair
    122589256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecad03032]
    122589256
   03036 Chromosome and associated proteins [BR:ecad03036]
    122589256
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122589256
DNA replication proteins [BR:ecad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122589256
  DNA Replication Termination Factors
   ELG1-RFC complex
    122589256
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122589256
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122589256
  Check point factors
   HRAD17(Rad24)-RFC complex
    122589256
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 AAA_16 RuvB_N AAA_11 AAA_5 Mg_chelatase AAA_14 SLFN-g3_helicase AAA_assoc_2 AAA_24 nSTAND3 AAA_18 ResIII DNAX_ATPase_lid PhoH AAA_30 AAA_2 AAA_28 AAA_19 RNA_helicase AAA_7 TIP49_C NPHP3_N AAA_25 bpMoxR DUF815 TIP49 Parvo_NS1 Cdc6_lid IstB_IS21 DUF3853 NB-ARC
Other DBs
NCBI-GeneID: 122589256
NCBI-ProteinID: XP_043617458
LinkDB
Position
2:complement(37612257..37617510)
AA seq 339 aa
MAPLMQSTQPWVEKYRPRRVKDVAHQDEVVRVLTNTLETTSCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYKNRVLELNASDDRGINVVRTKIKNFAAVAVGSAHQVGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMST
RIEHICKEEGLNLDSEALSTLSSISQGDLRRAITFLQGAARLYGSSISSKDLISVSGVVP
HEVVQALLAACRRGLFDSANKEVNNIIAEGYPVSQILSQLFDIVVQSDDASDEQKARICR
KLGESDKCLVDGADEYLQLLDVCSSMITAFSNAPEGYSN
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccattgatgcagagcactcaaccttgggtcgaaaaatatcgaccaagacgagta
aaggatgttgcgcatcaagatgaagttgttcgagtcctcaccaatactctcgaaaccact
agttgtccacacatgttgttttatgggccacccggaacaggaaagactacaactgcttta
gctattgctcatcagctttatggtcctgaactttacaagaacagagttctcgagctgaat
gctagtgatgaccgtggaatcaatgtggttcgtactaaaatcaagaattttgctgcagtt
gctgttggttctgctcatcaagtgggttatccctgcccaccttttaaaattatcatcctt
gatgaggcagattcaatgactgaagatgcgcagaatgctttacgtcgtacgatggaaact
tactcaaaagttacaagattcttttttatatgcaattacatcagcaggattatagaacct
cttgcttctagatgtgccaagtttaggtttaagccactctctgaagaaatcatgagcacc
cgtatagagcatatctgcaaagaggaaggccttaatttggactcagaggctctctcaacc
ttgagttccatatctcaaggagatcttcgccgggctattaccttcttgcagggagctgct
cgcctttatggatcctcaatttcttccaaggacttgattagtgtttctggggtcgtccca
catgaagttgttcaggctcttcttgcagcttgtcggcgtggtttatttgactctgcaaac
aaagaagtcaataatattattgcagaggggtatccagtcagtcagattctttctcagtta
tttgatattgttgttcaatctgatgatgcatccgatgaacaaaaggcaagaatatgcaga
aagttgggtgaatctgataagtgccttgttgatggagcagatgagtatttgcaactgctg
gatgtatgcagttcaatgatcacggcatttagtaacgcaccagaaggatattccaattaa

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