Erigeron canadensis (horseweed): 122589273
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Entry
122589273 CDS
T07610
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122589273
Enzymes [BR:
ecad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122589273
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
122589273
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Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
122589273
NCBI-ProteinID:
XP_043617482
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All DBs
Position
2:complement(45142785..45147770)
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AA seq
886 aa
AA seq
DB search
MGEEMKQQKFGGFPFKPYSIQIDFMSSLYDSLDKGGIAMLESPTGTGKTLSIICSAMQWL
IDRKKRVNYETLVDTNQNELDNDDEPDWLKSSLMNNKVESPKKKVKVKKRNEFTIKKRDK
NGIEESFRDLFDHFIEVDYKMYGNGANVKSDGELLDDKEFLVDEYESEDEKNGKRKGGGI
CSGSSSSEGEEEGDDDEEEEEADFKIYFCSRTHSQLSQFVKELRKTVFARELKVASLGSR
KNFCINEEVVKLGNSALINERCLDLQKKKKSQVSKMKNSGVGGKVRQRKAQGGCPMLSKQ
KLQKQFRNEINEQGPLDIEDLVRLGGNVGTCPYYGSRSLVPAADLVVLPYQSLLSKSSRE
SLGLNLKNSVVIIDEAHNLADSLISMYDAKITLSQLELVNSSLEGYFQKFSNLLGPGNRR
HIQTLMILTQAFIQTLCNQDNATLVPSAKSGSECSLCINEFVFSLNIDNINLVKLLQYIK
DSNMIHKVSGYGDRIFTLQNDTTSILSGFRALAGILLSLTNDDSDGRIIISRKRSTDSGQ
QGGYLKYVMLTGEKIFHEIVNEAHAVVLAGGTLQPIEETQGRLFPWLPPDQLNFFSCGHI
ISSDNILPISVSHGPSGQSLDFSYNSRSTSAMVGELGLLLCNLVSAVPQGIIVFLSSFDY
EEHVYNAWKASGILSRIMKKKRVFREPRKSTEVETILKEYKDSIDAASATSSKDLVVTHN
GAMLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDIELMERVKHIDGLGDPTKNSNG
ACFSGDAQAGFEILRNCKHRGREYYENLCMKAVNQSIGRAIRHINDYAAILLVDARYKSD
SSKNDLSHRTNKLPRWIRERLISNTNNYGEVHKLLHQFFKFHKSKS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagaaatgaagcagcagaaatttgggggttttcccttcaaaccctactctatt
caaatcgatttcatgagttctctttacgattccctcgataaaggcggtatcgccatgctc
gaaagccccactggtacaggaaagaccctaagtataatctgtagcgctatgcaatggcta
attgatcggaaaaagcgcgtaaattatgaaactttagttgatacgaatcagaatgaatta
gataatgacgatgaacccgattggctcaaaagtagtttaatgaataataaagtagaaagc
cctaaaaagaaggttaaggtcaagaaaagaaatgaatttacaattaagaaaagagacaag
aatggaattgaggagagttttagggacttgtttgatcattttattgaggtcgattacaaa
atgtatgggaatggtgcgaatgtgaaaagtgatggagagttattagatgataaggagttt
ttggtggacgaatacgagagtgaagatgagaagaacgggaaaagaaagggtggtggaata
tgcagtggctcgtcttcgagtgaaggtgaagaggaaggtgacgatgacgaggaagaggaa
gaggcagatttcaaaatttatttctgtagcagaactcattcgcagctatcgcagtttgtt
aaagaattgaggaagacggtttttgctagggagttaaaggttgcatctttgggctctagg
aagaatttttgcataaatgaagaggtggtgaagcttgggaattctgctctcatcaatgag
cgatgtttggatcttcaaaagaaaaagaaaagccaagtgtcaaaaatgaagaattcaggt
gttggggggaaagtacgccagagaaaggcccaaggtggatgcccgatgcttagcaaacaa
aagctacaaaagcagttcaggaatgagataaatgagcagggacctttagatattgaagac
cttgttcggcttggaggcaatgtaggtacttgcccatactacggttcaagaagcttggtc
cctgcagcagatcttgtagttcttccttatcaatctcttctttcaaaatcttcacgggaa
tcacttggtttaaacttgaagaatagtgttgttataatagatgaagctcataatcttgct
gactctctcatcagcatgtatgacgcaaaaattactttgtcccagttggaacttgttaac
tccagtttagagggttacttccaaaaatttagcaatcttctaggaccaggcaatcgaagg
cacattcaaacattgatgattcttactcaagcctttatacaaaccttgtgcaaccaggat
aatgctactttggttccttcagcaaaaagtggctccgagtgctccttgtgcatcaatgaa
tttgtgttttccctcaacattgacaacataaatttggtgaagttgctacaatatattaaa
gacagcaatatgattcacaaggtcagtggctatggagatagaatatttaccttacaaaat
gatactacaagcattttatcagggtttcgtgcattagctggaatattactatcactgaca
aatgatgatagtgatggacggataataatatcaagaaaaagatcaactgactctggacag
caaggaggatatttaaagtatgttatgctcactggggagaagatttttcacgagattgtt
aatgaggcccatgctgttgtattggctggtggaactctccaacctattgaagaaacacag
gggcggctctttccatggttaccgccagatcaattgaatttcttctcttgtggtcatata
atctcatcggacaatatattacccatttctgtttcacacggaccctctggccagtccttg
gattttagctataactctagaagtacatcagccatggttggggagctagggcttctactt
tgcaatctggtttcagcagttccacagggtataattgtgttcttatcttcatttgattat
gaagaacatgtctacaatgcatggaaagcttcaggcatccttagtagaataatgaagaag
aaacgcgtattcagagagccaagaaaaagcacagaagtggaaactattttgaaagaatac
aaggattcaattgatgcagcatctgctacaagctcaaaggatttagtagtaacccataat
ggtgcaatgcttcttgctgtagttggaggtaagatatcagaaggtatcaactttagtgat
gggatgggccggtgcatagtcatggttggattgccatatccaagtccatctgatatcgag
ttgatggaacgagtcaagcatattgatggccttggagacccgacaaaaaactcgaatggt
gcgtgcttcagtggagatgctcaagcaggattcgagattctaagaaattgcaaacataga
ggaagggagtactatgaaaatctttgcatgaaggctgtaaatcagtcaatcggcagagcg
attaggcacattaatgattatgctgcaatcttattggtcgatgcacgttacaaatcagat
tcctcgaaaaatgacctctcgcatcgcactaacaaacttccacgttggattagagagcgc
ctcatttctaacaccaataattatggagaagtccacaaattacttcatcaattcttcaaa
tttcacaaaagtaagtcatag
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