KEGG   Erigeron canadensis (horseweed): 122589308
Entry
122589308         CDS       T07610                                 
Name
(RefSeq) serine-threonine kinase receptor-associated protein-like
  KO
K13137  serine-threonine kinase receptor-associated protein
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122589308
Spliceosome [BR:ecad03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    122589308
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_NWD2_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st eIF2A Beta-prop_IP5PC_F FlaF_Ig-like Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 122589308
NCBI-ProteinID: XP_043617518
LinkDB
Position
2:complement(44844284..44847806)
AA seq 339 aa
MDKKKVAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSTPMLRNGETGDWIGTFEGH
KGAVWSCCLDTNALRAASASADFTAKLWDALTGDVLHSFDHKHIVRTCSFSEDTHFLLTG
GFEKILRIFDLNRPEAPPREVEHSPGSVRTVAWLHSDQTILSSCSDSGGVRLWDVRSGKI
VHTLETKSSVTSAEVSKDGRYITTADGSSVKFWDANHFGLVKSYDMPCNVESASLEPKFG
DKFIAGGEDMWIRLFDFNTGEEIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG
PLNPKEKESSVPNGPSKEVKPITAEEIGTKLEDLKVGRE
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggataagaagaaagtagcagtgccattggtatgccatggacattcacgtccagttgtt
gatttgttttatagtcccatcactcctgatggttttttcctcatcagtgccagcaaagat
tcgacgcctatgcttagaaatggagaaactggagactggataggaacttttgaaggacat
aaaggtgcagtctggagttgttgtctagatactaatgctcttcgtgctgcatctgcgtct
gcggatttcacagcgaagttgtgggatgcgttaactggggatgtgctgcactcgtttgac
cacaaacatattgttcgaacgtgttccttttctgaggatacacattttctgctgactggc
gggtttgagaagatactacgcatattcgatttaaatcgaccagaggcgcctccaagagaa
gttgagcattctccaggctcagtcaggactgttgcgtggctccacagtgaccaaacaata
ttaagttcctgctctgattctggtggagtaaggctatgggacgtgagaagtgggaagatt
gttcatacccttgaaacaaaatcatctgtgaccagtgctgaagttagtaaagatgggcgt
tatataaccactgctgatggatcttctgtcaagttctgggatgcaaaccattttggattg
gtgaaaagttatgatatgccctgcaatgtggaatcagcttcgttggaaccaaaatttggt
gataagtttattgctggaggggaagacatgtggattcgtttatttgatttcaacactggt
gaagaaattgggtgcaacaagggtcaccatggtccggtccattgtgtgaggttctcacct
ggaggtgaatcatatgcatctgggtcggaagatggaaccataagaatatggcagacaggg
cctctgaatccaaaggagaaagaaagttctgttccaaatggaccaagcaaggaggtgaag
cccataacagctgaggaaatcggcacgaaattggaggatttgaaagttggcagggagtag

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