Erigeron canadensis (horseweed): 122589334
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Entry
122589334 CDS
T07610
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122589334
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122589334
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122589334
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122589334
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122589334
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122589334
Prokaryotic type
Other AARSs
122589334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
122589334
NCBI-ProteinID:
XP_043617557
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All DBs
Position
2:2877156..2884727
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AA seq
716 aa
AA seq
DB search
MKICISPPKSPMSPLYRHDTSSSSSDSTKSTPSDDERLTKNVGEEVPMEQGPKTTPSPLI
KVDRATYDEKWAEHEKMMDKEAENMLRLLQEDAIRRATLLPDSTIFEYWYPEDEDMDPAQ
YFEKRLETLAVHKAAGKNPYANLMPASISIPEFLDKYASLKTDQHMEYAKECLAGRVMNK
LSSSNLITYDLVGFGGQIQVMAFPKLSVMEEAKFFKRHCDLKNGDYIGVIGFPGKSSMGE
LSIILKTFVNMSYCLHRMPPMTYNVKKTDVWTPGSGRYPDAYTLNDQETRYRRRFLDLTV
NSEVKDIYKARTKVMSYLRHFFENLGFLEVETPTLTMIPGGAATCPFVTHHADLNMIMYM
RNAPGLYLKQLVVGGIERVFEIGKQFRNEAIDLMHNPEVTTCEFYMALADYKDLMELTEQ
ILSGMVKELTGGYKVTYHANGYDNLPIEIDFTPPFRRISMIEELEKMANLSLPKDIESEE
ARQCLADACTKFDINCPPPQTTARLLEKLVGHFLEGTCVNPTFIIDHPEITSPLAKAHKY
KPGLTERFVLIINKLELVNGYSVENDPVVQRQRFSDRLKDHQSGNEEALSLDEEFCTALK
YGIPPTVGWVLGIDRLTMLLTDSLNMKEVILFPAMKPQPHYGPAIKGEIVATGVNYNAED
DTSTVGAITMKEALTASETLRKFLLQSQNMTSEYPNAKLREELDLNLSYLRNSKLQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaagatatgcatatcaccaccaaaaagccccatgtccccgttatataggcatgatacc
agttcttcttcatcggattctaccaaatctacgccttctgacgacgaacgtctaaccaaa
aatgttggtgaggaggttcccatggaacaaggcccgaaaaccactccgtcgccattaata
aaggttgaccgtgctacttatgatgaaaaatgggctgagcacgaaaagatgatggataag
gaggccgagaatatgcttcgtcttctacaggaggatgctataagaagggctactcttctc
ccagattcaacgatcttcgagtactggtatccagaggatgaagacatggatccagcgcaa
tattttgaaaaacggctggaaacacttgctgttcataaggcagcaggaaagaacccatat
gctaaccttatgcccgcctcaatttccattcctgaatttctagacaagtatgcaagctta
aaaactgatcagcatatggaatatgcaaaagaatgtttggctgggagagttatgaacaaa
ctatcttcatcaaacctgataacttatgatttggttggttttggtggacaaattcaagtt
atggcttttccaaagttatctgtaatggaagaagctaaattttttaagcgtcattgtgat
ttgaaaaatggagattacattggtgttattggctttccaggaaaaagcagtatgggagag
ttgagtattatcctaaaaacatttgtgaatatgtcttattgtcttcataggatgccacct
atgacttacaatgttaagaagactgatgtttggactccaggaagtggcagatatcccgat
gcttatactttaaacgaccaggaaacacgctatcgtcgacgttttctggatctcacagta
aattcggaagtaaaagatatatacaaggctcggacaaaggtgatgtcttatttaagacat
ttcttcgaaaatcttggttttctggaggttgaaactcctacattgaccatgattcctggt
ggagctgccacatgtccttttgtgactcatcacgcggaccttaatatgataatgtatatg
cgaaatgcccctggactatatctgaagcagcttgttgttggtggaatagaacgtgtattt
gagataggaaagcagttcagaaacgaggcaattgatctaatgcataatcctgaagtcacg
acgtgtgagttttatatggctcttgcagactacaaggacttgatggagctaactgaacaa
atattaagtggcatggtgaaggagttaacgggtggctacaaagttacatatcatgctaat
gggtatgataatcttccaattgagattgacttcactcctcctttcagaaggatttctatg
attgaagagttggagaagatggcgaatcttagcttacctaaagacattgagagtgaagaa
gctagacaatgtcttgctgatgcatgcaccaagtttgatatcaattgtcctccacctcaa
acgactgcacgattgttggagaaacttgtgggacattttctggaaggcacatgtgttaat
cctacttttataattgatcatcctgagataacgagtccactagcaaaagctcataaatac
aaaccaggactgacggagcgttttgtattgattattaacaagcttgagcttgttaatgga
tactccgtagaaaatgatccagtggtacaacgccagcgcttttccgatcgattaaaggat
catcaatcaggaaatgaagaagcgctgtctttggatgaggaattctgtacggctcttaaa
tacggtattccgccaactgttggttgggttttgggtattgataggcttacaatgctgctt
actgattcactaaacatgaaggaagttatactatttccggctatgaaaccgcaaccacac
tatggaccagccattaaaggggaaattgtggctaccggtgttaattataatgctgaggat
gatacgtcaactgtgggagcaattacaatgaaggaagctcttacagcgtccgaaactctc
aggaagtttctgttacagtcccagaacatgacatcagaatatccgaatgcaaagttaagg
gaggagctcgacctgaatctaagttatctaagaaatagcaaattacagtag
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