Erigeron canadensis (horseweed): 122589355
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Entry
122589355 CDS
T07610
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122589355
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122589355
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122589355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122589355
NCBI-ProteinID:
XP_043617578
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All DBs
Position
2:7340964..7346481
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AA seq
470 aa
AA seq
DB search
MGGKSSKEDRRSYRQSPSFQSASSFSGSQYGSHPQQSYSYPPQEIQNYPVREAYPAYQQH
YPAAVPAPGPVPGFGSQPNKPQKKLDRRYSRIADNYSSLEQVTEALARAGLESSNLIVGI
DFTKSNEWTGSRSFNRKSLHHIGDGFNPYEQAITIIGKTLAAFDEDNLIPCYGFGDASTH
DQDVFSFYPEERFCNGFEEVLSRYREIVPHLKLAGPTSFAPVIEQAMTIVEQSAGQYHVL
LIIADGQVTRSVDTESGRLSPQEQRTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNI
PARDFDNFQFVNFTEIMAKNVPPIRKETEFALSALMEIPTQYKATIELNILGSHKGVSPN
RVALPPPVYGASSFSNSKPTHSSSFQKGSQFNYGQSSPARAAPYSDQTMSQSTSSSIPNS
TYDNQVCPICLTNPKDMAFGCGHQTCCECGQTLQSCPICRKSIETRIKLY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggggtaagagttcaaaagaagataggcgtagctacaggcaatcgccgtcgtttcaa
tcggcatcgtcgtttagtggaagtcagtatggaagtcatccacaacaatcgtattcttat
ccgccacaagagatacagaattaccctgttagagaggcgtatcctgcgtatcagcagcat
tatccggctgctgtgcctgcacctggtccggttccgggatttggaagtcaaccgaataaa
ccgcagaagaagcttgataggaggtattcgaggattgcggataattacagctctttggaa
caggtaaccgaagctcttgctcgtgcagggctcgagtcttctaacctcattgttggtatc
gacttcactaagagcaatgaatggactggttcacggtctttcaatagaaaaagcctacat
catattggagatggttttaatccatatgagcaagcaataacaatcattggtaaaacattg
gctgcctttgatgaggataacctgattccctgttatggttttggagatgcatcaacacat
gatcaagatgttttcagcttttatccagaagagagattttgtaatggtttcgaggaagta
ttgagtagataccgggaaattgttcctcatctaaagcttgcaggaccaacatcatttgcc
cctgtcattgaacaagctatgacaatagtggaacaaagcgcagggcagtatcatgtatta
ttaattattgcagatggacaggttacaagaagtgttgatactgagtcaggtcgtttgagt
ccacaagaacagagaacagtagatgctatagttcaagccagcaagcttccactgtctatt
gtattagttggagttggagatgggccttgggatatgatgagagaatttgatgataacatc
cctgctcgtgactttgataatttccagtttgttaatttcacagaaatcatggccaagaat
gtaccgccaatccgaaaagagacggaatttgctctttcagctttgatggagattcctacc
caatataaagcaacgattgaactgaatatactaggtagccacaaaggagtttctccgaac
agggttgcccttcctcctcctgtttatggtgcatcctcttttagcaactcaaaaccaaca
cattcaagtagctttcagaaggggtcacaatttaattatggccaaagtagtcctgctcgt
gctgctccttattctgatcaaacaatgtctcagagcacctcttcatctattccaaattct
acatacgacaatcaggtatgccctatctgccttacaaacccaaaggacatggccttcggc
tgtggccatcagacatgttgcgagtgtggacaaactcttcagtcgtgtcctatttgtcga
aaatcaattgaaactagaataaagctctactaa
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