KEGG   Erigeron canadensis (horseweed): 122589693
Entry
122589693         CDS       T07610                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122589693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122589693
   03041 Spliceosome [BR:ecad03041]
    122589693
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122589693
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122589693
Spliceosome [BR:ecad03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122589693
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 PHM7_cyt
Other DBs
NCBI-GeneID: 122589693
NCBI-ProteinID: XP_043617952
LinkDB
Position
2:complement(28240289..28243221)
AA seq 415 aa
MDGPYVKREDEQLQFDNINHEEDDEYNGDVDIHNNNNNQFNNNNNNLVDELPQHSSINND
SSAAAAASAAGKLFVGGIAWETSEESFSNYFNKYGELTDSVIMMDKITGRPRGFGFVTFA
NSADADKVLEQDHVIDGRPVEVKRTVPREDAQGSRGVSRTKKVFVGGIPLTLTEDEMREY
FSNYGGIIEHQIMLDHVTGRSRGFGFVTFDSEEAVEKIFSDGQIHELGGKQVEIKRAEPK
RAGGDFSYDNRSRRGGGSKSYGSGGSGFGRGSAGYGGGYGGKSDRGYDGYGGGYAGYNGY
GGGYGGGSVGFYPGYGGYGYGYGYGGPMYGGAGYAGAGYGGYSGSASYDGGRGYGSGSTG
SGAYGKGVGRGSGGGAGVGGSYGYGYGYDGGKAYDNGNGGSSGGSTGGRFHPYRK
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggatggaccatatgtgaaaagagaagatgagcaactgcagtttgataacatcaatcat
gaagaagatgatgaatataatggtgacgtggatattcataataataataataatcaattt
aataataacaataataatttagtagatgaattacctcaacattcttcaatcaataatgat
tcttcagcagcagctgcagcttcagcagctggaaaactatttgttggaggcattgcttgg
gagacttctgaagagtctttcagcaattacttcaacaagtatggagagttaacagattct
gtgataatgatggataaaattactggccgaccacgcggatttggatttgtaacttttgca
aactcagctgatgctgataaagttctagagcaagatcatgtcatagatggtagacctgtt
gaagtgaagaggacagttcccagagaggatgcacagggtagtagaggggtatctagaacg
aaaaaagtctttgttggtggtataccattgactttaacagaagatgaaatgagggagtat
ttttctaactatggtggtataattgagcatcaaattatgctagatcatgtcacaggacgc
tcaagaggttttggttttgttacatttgatagtgaagaagccgtggaaaagattttttct
gatggtcaaatacatgaacttggaggcaaacaggtggagataaaaagggcagagccaaag
agagctgggggtgatttttcatatgataatcggtcacgtcgtggtggtggttctaagtct
tatggtagtggcggcagcggctttggtaggggttcagctggttatggaggtggctatggt
gggaaatcagatagaggatatgacggttatgggggtggttatgccggttataatggttat
gggggaggctatggaggtggctctgtaggtttctatcctggttatggtggatatggttat
ggttatggttatggtggacccatgtatggtggtgctggatatgcaggtgctggttatggt
ggttatagcgggtctgctagctacgatgggggcaggggctatggaagtggtagtacagga
agtggtgcttatggtaaaggggttggcaggggaagtggaggcggagcaggtgtaggtggt
agttatggatatggatacggatatgatggtggtaaagcatatgataatggcaatggtggc
agcagcggtggtagcaccggcgggaggtttcatccatataggaagtga

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