Erigeron canadensis (horseweed): 122589765
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Entry
122589765 CDS
T07610
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122589765
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
122589765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Ctf4_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_Vps41
eIF2A
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_VPS8
Beta-prop_WDR41
Histone_HNS_N
Beta-prop_DCAF12
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
122589765
NCBI-ProteinID:
XP_043618023
LinkDB
All DBs
Position
2:complement(40722817..40728721)
Genome browser
AA seq
982 aa
AA seq
DB search
MKIRSMKLKEAHKHNGVRSYCTILWDLTAAHIVTASAADAVISIHDALLPSLTPTYIRNH
KDGVTNLVLSPNSTCLASASNDRSVKLYKFPGGEFETNISRFTLPIRALSFNRSGTMLAA
GGDDDGIKLINTIDGSIARVFKGHRGSITAIAFDPKSEYLASVDSVGTVMIWELQSGAIV
HTLKHIAPNTTSDFSTLTALGWSPDGEMLAVAGLKNDVVMYDRDTAEKLFTLRGDHTQAV
CFVAWSLNGKYVATSGLDRQVLIWDVVKKQDIERQKFDEGICCMAWKPHGNALAVIDVMG
KYGVWDSVVPSSMKSPTEGVPSSTSKRNDGLVFFDEEEHEPSTSGSLSDDDGEDSLAGSE
LPSRKRLRKHSTYDEDSDEDNNDETSLLPKTESRKKPSIAGRGNMNNGKATSTVPMVFNG
PAMQEAFQSGATPVQPGKRRFLCYNMLGSITTMKHDEYSHIEIDFHDTGRRLRVPAMTDH
FGFTMASLNENGSVFANPCKGEKNMSVLMYRPFKSWANNSEWSMRFEEEEVRAVALGTSW
VAAVTSLNFLRIFTEGGLQKNVVSLDGPVVTASGFGDELAVVTHSCPTLPSNEQMLEFIV
FKVSNGTQLVRGRLPLTPGSCLTWFGFSEEGQLSSFDSMGVLRVFTNQFGGSWFPLFSAN
KLKKKDENYWVVGLNSSKLFCILCKSPDKFPQTIPKPVLTLLDFSIPLASSDLGAENLEN
EFLVSNMHLSQIQRRIHETEALDQDTTSLDDQAFTTETALDRCILRLIASCCNGDKLVRA
IELVKLLSLEKSVRGAIKLVTAMKLPNLAERFNTILEERLLKEAAETMLKETTEPNSMTG
TDTSKIFTSPEVCKAPEPVNESPSVQLSSPSFVIKKTVEEPATVQLSSPLFMKKKTVEEP
ATVQLSSPLFVKKKTKEEPPKVVKVSEPKESTKSENKTPAKKIVELKAGNNPFAKSSSNN
QEKTSLFDSLKKLKKNESPSTK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagatcaatgaagctgaaggaagcacacaagcacaacggagtgaggtcgtac
tgtacgatactgtgggacctcactgccgcccacatcgtgacggcatccgcggcggatgcc
gtcatttcaattcacgatgcgctcttgccttcgcttacgccgacgtatattcggaatcat
aaagatggggtcactaatttggttcttagtcctaattccacttgcttggcctctgcatct
aacgaccgatccgttaagctttataaattccctgggggagagtttgagacaaatatttcc
agattcacattgcctattcgtgcattatctttcaacagatctggaacgatgttggcagct
ggtggtgatgatgatggtattaaacttattaacacaatagatggttcaatagcaagggtt
ttcaaaggacatagagggtctatcacagcgatagcttttgatccaaaaagtgaatacctg
gcatcagtcgattcagttggaactgtaatgatctgggagctccaatctggtgcaatagtt
cacactcttaaacatatcgctcctaacaccacctccgacttttcaaccttaactgcactt
ggctggagtccagatggtgagatgttagctgttgctggtttgaaaaatgatgtggtcatg
tatgatagagatactgctgaaaagcttttcacattaagaggtgatcacacccaagctgtg
tgttttgtggcttggtcacttaatggaaaatatgttgctacctctggtttagacaggcaa
gttttgatctgggatgttgttaaaaaacaagacattgaaagacagaagtttgatgaagga
atatgctgcatggcatggaaaccacatgggaatgcattggctgtcattgatgtaatgggg
aagtatggtgtatgggattcggttgttccatcatctatgaagtccccaacagaaggagtt
ccctcttcgacttcaaaaagaaatgatggtctagtcttctttgacgaggaagaacacgaa
cctagtacatctggcagtctaagtgatgatgatggtgaagacagccttgcgggttctgaa
ctacctagtagaaagagattaagaaagcattctacatatgatgaagattcagatgaggat
aataatgacgagacaagtttacttccgaaaactgagtcccgcaaaaaaccatccattgct
ggtaggggaaacatgaataatggaaaggcgacgtcaacagttccaatggtgtttaatgga
ccagcaatgcaggaagcttttcagtcaggtgctactcccgtgcagcctggtaaaagaaga
tttttatgttataatatgcttggaagtataaccacaatgaagcatgatgaatactcccat
atagagatcgattttcacgacactggcaggcgactccgagttcctgcaatgactgatcac
tttggtttcactatggcttccttgaatgaaaatggaagtgtttttgcaaacccatgcaaa
ggtgagaaaaacatgagtgttctcatgtaccgtccatttaaaagctgggcaaataatagt
gagtggtctatgcgatttgaagaagaagaagtaagagctgtagcacttggtacttcatgg
gttgctgctgttacaagtttaaattttctaaggatattcactgagggtggtttgcagaag
aatgttgtttctcttgatggaccagttgtgactgcatcaggctttggggatgaacttgca
gtggtcacacattcctgtcccactctcccttcaaatgagcagatgctagaatttatagta
tttaaagtttctaatggaacccaacttgttagaggacggttgccattgactcctggctca
tgtttaacatggtttggtttcagcgaagaaggtcaactaagttcatttgattccatgggt
gttctccgggtgttcactaatcagtttggtggcagctggttccccctttttagtgctaat
aagttgaaaaaaaaggatgaaaactactgggtggttggattaaactcaagcaagttgttc
tgtattttatgcaaatctcctgataaattcccacagaccattcccaaaccagttctcacc
ctattggatttttcaataccgcttgcatcatctgaccttggagcagaaaatcttgaaaat
gagttccttgttagcaacatgcatctttcccagattcaaagaaggattcatgaaacagag
gcactggatcaggataccacgtcactggatgatcaggcctttacaacagaaacagccttg
gatagatgcattttgaggctcattgcatcctgctgtaacggggataagcttgtgagagca
attgagttagttaagcttctttcactcgagaaatctgttagaggtgcaataaagcttgtg
acagcaatgaagctaccaaatttggcagaaaggttcaacaccatattggaggaaaggtta
ctcaaagaagctgcagagactatgcttaaagaaacaacagaaccaaatagtatgacgggt
actgacacaagcaaaatatttacatcaccagaagtctgcaaggctccagaacctgtgaac
gaatcaccatctgtgcaactatcctcgccttcgtttgtaataaaaaagactgtagaagag
ccagctacggtgcaattatcttcgcctttatttatgaagaaaaagactgtggaagagcca
gctactgtgcaattatcttcacctttatttgtgaagaaaaagactaaagaagagccacct
aaggttgttaaggtgtcagaaccgaaagaaagtacaaaatctgaaaataaaactccagcc
aagaagattgtagagctgaaggcaggaaacaacccgtttgcaaagtcatcctcaaacaat
caagaaaaaacctcattgtttgattctcttaagaagttgaagaagaatgagagtccaagt
actaaataa
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