KEGG   Erigeron canadensis (horseweed): 122589832
Entry
122589832         CDS       T07610                                 
Name
(RefSeq) protein FIZZY-RELATED 3
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122589832
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122589832
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     122589832
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 NBCH_WD40 Beta-prop_SPT8 MIOS_WD40
Other DBs
NCBI-GeneID: 122589832
NCBI-ProteinID: XP_043618088
LinkDB
Position
2:26544276..26547546
AA seq 509 aa
MDTNQRRKSGINLPAGMSETSLRLNTGGVGSPSPLIRTLSTPSPRSMSPRTISNLSSSPS
SKSAGVCSDRFIPCRSSSRLHTFGLIDKPSPVKEGGGGTNEAYTRLLRCELFGSDFGYSS
PAGSGGTKGSGFGSGLGSPIGSPNRNMLRFKTDNSGQNSPYSGSILGQDNGLNFESTTPP
KPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGSCVYLWTATTSKVTKLCDL
GPNDGVCSVQWTREGSYISVGTSLGKVQVWDGTQCKKVRTMGGHQTRTGVLAWSSRILSS
GSRDRNILQHDLRVPSDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQHATQP
VLKLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTANGNQLNHVDTGSQVCNLAW
SKNVNELVSTHGYSQNQIMVWKYPTLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETL
RFWNVFPSVKSPAAVRDSGLMSLGRTHIR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggatacaaaccaaagaagaaaaagcgggatcaatctccccgctgggatgtcggaaacc
tcacttcgtctcaatacgggtggagtcgggtctccttccccgttgattcgaaccttgtct
acaccttctcctcgttcaatgtcgcctagaacgatctcgaatttatcttcttcgccgtct
tctaagtcagctggagtctgcagtgatcggtttatcccgtgtagatcgtcttctagattg
cacacattcgggttgattgataaaccgtctccggttaaagaaggcggtggagggactaat
gaggcttacacaaggttattaaggtgtgagttatttggttctgattttgggtattcttct
cctgcaggtagtggtgggactaaaggatctggctttggttcgggtttggggtcgccgatt
ggcagtccgaataggaacatgctgcggttcaaaacggataattcgggccagaattcgcct
tattcgggctccatattgggtcaggataatgggttgaactttgagtctactactccacct
aagcctccaagaaaagtccccaaaacacctcataaggttttggatgcaccatcgcttcaa
gacgacttctacttgaaccttgtggattggtcatcacagaatgtacttgcagttggactc
ggcagctgtgtttatttatggactgcaacaaccagcaaagtgaccaagctgtgtgatttg
gggcctaacgacggggtgtgctcagttcaatggacccgagaagggtcttatatatctgtt
ggtactagtctaggaaaagttcaggtttgggatgggactcagtgtaagaaggttcggaca
atgggtggacatcagacaagaactggagtgttggcatggagctcacgcatattatcatcg
ggtagcagagatcgtaacatacttcaacacgatcttcgtgtccctagtgactacattagc
aagcttgttggccataaatcagaggtatgtgggcttaaatggtctcacgatgacagagaa
ctcgcatctggtggaaatgacaatcagctactagtttggaaccagcatgctacacagcct
gttctgaaactgacggagcacacagctgcagtcaaagcgattgcatggtcgcctcaccag
agcaaccttttggtttctgggggtggcactgctgacagatgcattcggttttggaacacc
gctaatgggaaccaactgaaccatgttgacactggaagccaagtgtgcaatctagcatgg
agcaagaatgtgaacgaattagtcagcactcatgggtactcccagaatcaaattatggtg
tggaaatatcctacattggctaaggttgcgactctaactggacatagcatgagagtattg
tatctagcaatgtcaccagatggtcaaacgatagtgaccggtgctggggatgaaacttta
aggttttggaatgttttcccctctgtgaaatctccggctgctgtaagggactctgggctg
atgtcattgggacgaactcatatcagatga

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