Erigeron canadensis (horseweed): 122589832
Help
Entry
122589832 CDS
T07610
Name
(RefSeq) protein FIZZY-RELATED 3
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122589832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122589832
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122589832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
NBCH_WD40
Beta-prop_SPT8
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
122589832
NCBI-ProteinID:
XP_043618088
LinkDB
All DBs
Position
2:26544276..26547546
Genome browser
AA seq
509 aa
AA seq
DB search
MDTNQRRKSGINLPAGMSETSLRLNTGGVGSPSPLIRTLSTPSPRSMSPRTISNLSSSPS
SKSAGVCSDRFIPCRSSSRLHTFGLIDKPSPVKEGGGGTNEAYTRLLRCELFGSDFGYSS
PAGSGGTKGSGFGSGLGSPIGSPNRNMLRFKTDNSGQNSPYSGSILGQDNGLNFESTTPP
KPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGSCVYLWTATTSKVTKLCDL
GPNDGVCSVQWTREGSYISVGTSLGKVQVWDGTQCKKVRTMGGHQTRTGVLAWSSRILSS
GSRDRNILQHDLRVPSDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNQHATQP
VLKLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTANGNQLNHVDTGSQVCNLAW
SKNVNELVSTHGYSQNQIMVWKYPTLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETL
RFWNVFPSVKSPAAVRDSGLMSLGRTHIR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaccaaagaagaaaaagcgggatcaatctccccgctgggatgtcggaaacc
tcacttcgtctcaatacgggtggagtcgggtctccttccccgttgattcgaaccttgtct
acaccttctcctcgttcaatgtcgcctagaacgatctcgaatttatcttcttcgccgtct
tctaagtcagctggagtctgcagtgatcggtttatcccgtgtagatcgtcttctagattg
cacacattcgggttgattgataaaccgtctccggttaaagaaggcggtggagggactaat
gaggcttacacaaggttattaaggtgtgagttatttggttctgattttgggtattcttct
cctgcaggtagtggtgggactaaaggatctggctttggttcgggtttggggtcgccgatt
ggcagtccgaataggaacatgctgcggttcaaaacggataattcgggccagaattcgcct
tattcgggctccatattgggtcaggataatgggttgaactttgagtctactactccacct
aagcctccaagaaaagtccccaaaacacctcataaggttttggatgcaccatcgcttcaa
gacgacttctacttgaaccttgtggattggtcatcacagaatgtacttgcagttggactc
ggcagctgtgtttatttatggactgcaacaaccagcaaagtgaccaagctgtgtgatttg
gggcctaacgacggggtgtgctcagttcaatggacccgagaagggtcttatatatctgtt
ggtactagtctaggaaaagttcaggtttgggatgggactcagtgtaagaaggttcggaca
atgggtggacatcagacaagaactggagtgttggcatggagctcacgcatattatcatcg
ggtagcagagatcgtaacatacttcaacacgatcttcgtgtccctagtgactacattagc
aagcttgttggccataaatcagaggtatgtgggcttaaatggtctcacgatgacagagaa
ctcgcatctggtggaaatgacaatcagctactagtttggaaccagcatgctacacagcct
gttctgaaactgacggagcacacagctgcagtcaaagcgattgcatggtcgcctcaccag
agcaaccttttggtttctgggggtggcactgctgacagatgcattcggttttggaacacc
gctaatgggaaccaactgaaccatgttgacactggaagccaagtgtgcaatctagcatgg
agcaagaatgtgaacgaattagtcagcactcatgggtactcccagaatcaaattatggtg
tggaaatatcctacattggctaaggttgcgactctaactggacatagcatgagagtattg
tatctagcaatgtcaccagatggtcaaacgatagtgaccggtgctggggatgaaacttta
aggttttggaatgttttcccctctgtgaaatctccggctgctgtaagggactctgggctg
atgtcattgggacgaactcatatcagatga
DBGET
integrated database retrieval system