Erigeron canadensis (horseweed): 122589858
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Entry
122589858 CDS
T07610
Name
(RefSeq) transcription factor PIF3-like
KO
K28361
transcription factor SPT/ALC
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122589858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122589858
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122589858
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
122589858
NCBI-ProteinID:
XP_043618113
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Position
2:complement(38919410..38922299)
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AA seq
269 aa
AA seq
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MYGNNNNDPSFSSSSSLESEDMSSFLQTFLSNSNTNTNNSKPLKYDQFTPSPSQISNEFV
DYDKRFSDLSSFYSPETDQVQKMGEGSRNSGGSRSTKRTRAAEIHNLSEKRRRSRINEKL
KALQTLVPNSNKTDKASMLDEAIEYLKQLQLKVQTLTMRNGYCLPPVYSQEHEMQRGIGM
GYNEGYRLQNPSEGVAAFPQNQGFSMRRDFGMPSHIGVQPNIMKPNPVFGSELANENQYG
FTNHSTSIKDISMSSKTVSGKLPSPGVSS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaacaacaacaatgatccttccttttcttcatcatcttcacttgaatctgaa
gacatgtcttcttttctccaaacttttctcagtaattccaacacaaacactaataacagt
aagccgctgaaatatgaccagtttacgccttctccgtctcagatttctaatgaatttgtt
gattatgataagagattttctgatctcagctccttttattcgcccgaaacggatcaggtg
caaaagatgggggaggggagtcgaaattcaggcggttcacgttctacaaagaggacacgg
gcagcagagattcataatctatctgagaagaggaggagaagtaggattaatgagaagttg
aaagcattgcagaccttggttccaaattctaacaagacggataaggcgtcaatgttggat
gaggcaattgaatatctaaagcagcttcaacttaaagtgcagacgcttactatgagaaat
gggtactgtttgcctcctgtatattcacaagaacatgaaatgcagaggggaataggaatg
ggatacaatgaaggatacagattgcaaaatccaagtgaaggggttgcggcttttccccaa
aaccaagggttctcaatgcgaagggactttggtatgcccagccacattggtgtgcaacca
aacataatgaaaccgaatcctgtttttggttcagaactagcaaatgagaatcaatatgga
ttcaccaatcattctacatctataaaggacatcagtatgtcatccaagacagtatcagga
aaacttccttcacctggcgtttcgtcataa
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