Erigeron canadensis (horseweed): 122589944
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Entry
122589944 CDS
T07610
Name
(RefSeq) upstream activation factor subunit spp27-like
KO
K15223
upstream activation factor subunit UAF30
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122589944
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122589944
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Ortholog
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GFIT
Motif
Pfam:
SWIB
DEK_C
DDHD
MHB
CCDC106
eIF-3c_N
SLX9
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
122589944
NCBI-ProteinID:
XP_043618211
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All DBs
Position
2:33894163..33897965
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AA seq
333 aa
AA seq
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MVGPAGMVSDSDLITRLREILATSDLTTTTTASVRRKLEEDFGIDLSDKKTFIRQQVDVY
LQNHQQETDDFEEIQEQLDAVNEDENEEEDKDKEEEGSDEEEEASNGKSSKKRSKKQNTE
VKKRGGGFTKLCSLSPQLQKLIGVPELARTEVVKQLWSYIKEHDLQDPANRKNIRCDGPL
HELFQVDSIDMFQMNKALAKHIWPLDSDGASVSSAPKEKQRKERDEDAEETKRKEKRQKG
GSGGGGSSGSGIHAPIPLSDALVKFLGTGENALARSDVVKRIWAYIKQNDLQDPSDKRRI
LCDDKLKELFDVDSFNGFTVSKLLTTHFIKPER
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggccggcgggtatggtatcggattcggacctcataacccgtctccgggaaatc
ttggccacgtcggacctcacgacaacaaccacagctagtgttcgcaggaaactagaagaa
gattttggcatagatttatccgacaaaaaaacattcattcgacaacaagtcgatgtttac
ttacaaaaccaccaacaagaaaccgatgattttgaagaaattcaagaacaattagatgct
gtaaatgaagatgaaaatgaagaagaagacaaagacaaagaagaagaaggatcggatgaa
gaagaagaagctagtaatggtaaaagcagtaaaaaaaggtcaaaaaagcagaacactgag
gtgaaaaaaagaggcggagggtttaccaagttatgtagtctttctccacaacttcagaag
ttaatcggggttcctgaattagccaggacagaggttgttaaacaactttggagctatata
aaagaacatgacttgcaagacccggccaatagaaagaacatacgttgtgatggaccgctt
catgaactttttcaagtagatagtatagacatgttccaaatgaataaggctcttgccaag
catatctggcctttggattctgacggtgcttcagtaagttctgcgccaaaggaaaagcaa
aggaaggagagagacgaagatgcagaagagacaaagagaaaggagaagcgtcaaaagggt
ggtagtggtggtggtggcagtagcggttctggtatccatgctccaattccactttcagat
gctctggtgaaatttctaggaacaggagaaaatgcattggcacgctccgatgttgtgaag
agaatttgggcctatatcaaacaaaatgaccttcaggatccatctgacaagagaagaata
ttatgtgatgacaagttgaaagagctctttgatgttgattcctttaatggattcactgtt
tcaaaactcctgactactcattttataaaacctgaaaggtga
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