Erigeron canadensis (horseweed): 122589965 Help Entry 122589965         CDS       T07610                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ecad  Erigeron canadensis (horseweed) Pathway ecad04142   Lysosome biogenesis ecad04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ecad00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     122589965    04148 Efferocytosis     122589965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecad04131]     122589965 Membrane trafficking [BR:ecad04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     122589965 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin DUF7384 zf-HC5HC2H TPR_WDR35 WD40 DUF2175 Motif Other DBs NCBI-GeneID:  122589965 NCBI-ProteinID:  XP_043618228 LinkDB All DBs Position 2:complement(36770610..36779157) Genome browser AA seq 1009 aa AA seqDB search MVHTAYDSIQILNDCPKKINAVEFHGSNLLIACSDGSLRIYGSESLSRSQSSSSSSSPDH ISQSLDLKKGLYVLERTVNGFSKKQVLAIKVLDSVGLLLSLSESIVFHRFPNLETVAVIS KAKGANLYAWDGNRGFLCFARQKRVCIYRHNGGRGFVEVKDFGVPDVVKSMCWSGENICM GIRRGYMILNATNGALAELFPSGRIAPPLVASLPTGELLLGKDNIGVLVDQNGKLIPEGR ICWSEAPSAVVIQKPYAIALLPRHIEVRSLRVPYPLIQTIGVRNVRSIQEGSNSILVSLD QSIYGLFPVPLGAQIVQLTASGNFEEALVLCKLLPPEDASLRASKEQSIHLRYAHHLFLN GSYEEAVEHFVASQVEITHVLSLYPSIVLPKSLASAEPEKDIDLIGDSNLSRGSSVTSDD MDSSPTCLLESDESCALESKKISHNTIMGLIKFLLRKRPNIVGKAAAETTEEVVSDAVGH TFDPYEGIRSKKLAKGRVNTTNSGAREMAAILDTALLQALLLTGQSAAALDLLKGFNYCD VNMCEEILQNGNHHACLVELYKYNSMHREALKLLHELVEHPKSDEPISVQAKKFKPETMI EYLEPLCRIDPMLVLEFSMLVLRSCPTQTIDLFLSGNIPADMVNSYLKEHAPSLQATYLE HMLSMNENEISPTLQNEMVQIYLSEVLDWYADLTARKKWDEKAFTPTRKKLISALQSISE YNLEVLLKRIPADAMYEERAILFGKMNQHELALSIYVHKLHLPARALSYCDRVYETGLNQ QQGKARGNIYLTLLQTYLKPPKTTKSSEKRIKKLVSSPSSGNLRGGWSSVKAKGRGLGKK IAEIEGAEDTRIKASSSDGARSDFDIDSDDLKEEGGSTIMVDEVLDVLSQRWDRVPGAKA LRLLPKEAKLQKLYPFLGPLMRRSSESYRNFSVIKKLRECESLQVKDELYIQRKAELKIT AESVCSLCQKRIGTSVFAVYPKSNTTVHFVCFRDSQSRKITRKGSSRRL NT seq 3030 nt NT seq  +upstreamnt  +downstreamnt atggtgcacacagcttacgattcaatccaaatcctcaacgactgccctaaaaagatcaac gccgtcgaattccacggctctaatcttctcatcgcgtgttccgacggatcgttacgaatc tacggctcagaatccctctcccgatcgcaatcatcatcatcatcatcatcacctgatcac atatctcagagtctagaccttaaaaaaggactatatgttctcgaaagaacggttaatgga ttctcaaagaaacaggttttggctatcaaagtattggattcggtagggctgttgctttcg ttatccgaatctattgtgtttcatcggtttcctaatttggaaactgtcgcggttatttca aaagctaaaggagcgaatttgtacgcgtgggatggcaacagaggctttttgtgttttgct aggcaaaagagagtttgtatttacagacataatggaggacggggattcgtggaggtgaaa gactttggtgttccggatgttgttaagtcaatgtgttggagtggggaaaatatatgtatg ggaattagaagaggatacatgatattgaatgccacaaatggtgcactggcagagctgttt ccatcggggaggattgctccacctttagtggcgtctcttcccaccggagaactgctacta gggaaggataatattggagtgcttgtggaccaaaatggcaaactcattccagaaggtaga atatgttggtccgaggctccttcagcagtcgtcattcagaaaccatatgctatcgccctt ttaccaagacacattgaggtgcggtctctgcgtgtcccgtacccactaatacaaactata ggtgtacgcaatgtacgcagtattcaagaaggaagtaattccatacttgtttccttagac caatctatctatggattgtttcccgttcctctcggtgcacagattgtacaactgacagca tctggaaattttgaagaagccttggtattatgtaagttgcttccaccagaagatgcaagt ctacgagcttcaaaggagcagtcaattcatcttagatatgcacaccatctcttcttaaat ggaagttatgaggaggccgtggaacactttgtggcatctcaagtagaaataacccatgtg ctctcattatatccatccattgttcttcccaagtcacttgcgtcagctgaaccagaaaaa gatattgatctaattggggactcgaatttatcaagaggctcatctgttacatcagatgac atggactcttctccaacttgtctactggagtctgatgaaagttgtgctcttgaatccaaa aaaataagccacaataccataatgggtctgatcaagttcttgctgagaaaacggcccaac atagttggaaaggcagctgccgagacaacagaggaggttgtttcagatgctgttggacat acctttgatccttatgaaggcattcgatccaagaaattagccaaggggcgagttaacact acgaactcgggtgcaagagagatggcagcaatattggacactgcacttctgcaggcttta cttctgactggccagtctgctgctgctttagatttactgaaaggttttaattattgtgat gtgaatatgtgtgaggagatcttgcagaatggaaatcaccatgcttgtttggtagaactt tacaaatacaactcaatgcatcgtgaagctcttaaacttcttcatgaattggtggagcat cccaaatcagatgaacctataagcgtgcaggccaaaaagtttaaacctgagacgatgatt gaataccttgaacccctgtgcaggattgacccaatgcttgtcctggaattctcaatgctt gttcttagaagttgtccaacacaaaccattgacctctttttatcaggaaatattcctgca gatatggttaattcttatctaaaagagcatgccccaagcttgcaagccacctatttggaa cacatgctctcaatgaatgaaaatgagatctccccaactcttcagaacgaaatggtgcaa atttatctttcggaagttcttgattggtatgctgatctcactgctcggaagaagtgggat gaaaaagcttttacccctactaggaaaaaactcatttctgcattgcagagtatttcagaa tataatcttgaggttttgttgaagcgaatcccggcagatgctatgtatgaagaacgagcg atcttgtttgggaaaatgaaccaacacgaacttgcattgtctatttacgtgcataagctt catcttcctgcacgggcactgtcttattgtgatcgggtgtatgaaacgggacttaaccaa caacagggaaaagctcgaggaaatatatatctaactttactgcagacatatttgaaacct ccgaaaacaaccaaaagtagtgaaaaaagaatcaaaaagttagtatcttcaccgagtagt gggaatttgaggggtggatggtcttcggttaaagctaaagggagagggttaggcaagaaa attgcagagattgagggtgcagaagatactaggatcaaggcaagtagcagtgacggtgcg agaagtgattttgatattgattcagatgatcttaaggaggaaggcgggtcaaccatcatg gttgatgaggtccttgatgtactgagccagaggtgggaccgtgttcccggagcaaaggct ttgagactcttgcctaaagaggctaagctacagaagttgtatccgtttcttggacctctc atgagaagaagtagtgagtcatatcggaacttttcagtgattaagaaactgagagagtgc gagagcctacaggtcaaggatgaactgtatatccagagaaaagcagaactgaagatcaca gccgagagtgtctgttcgctttgccagaaaagaattggaaccagtgtttttgcagtgtat cccaagagtaacacgacagtacactttgtttgcttcagagactcccagagtaggaaaatc accagaaaaggatcgtcaaggagactataa

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