Erigeron canadensis (horseweed): 122589994
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Entry
122589994 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122589994
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122589994
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122589994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WDR55
WD40_Prp19
Beta-prop_LRRK2
EIF3I
ASA1
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
CFAP251_N
Beta-prop_NOL10_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122589994
NCBI-ProteinID:
XP_043618262
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Position
2:complement(10468438..10475556)
Genome browser
AA seq
420 aa
AA seq
DB search
MRNIASKFFKRIHLRELCGNSIRSKKEKGNFEAECQKLWASKPMVWKYPQTERDSDTALE
HVYVDMQTQDGLTKSEMLLTGSHSNMFRCYEVGYAKWDGIKGEESVPDLLQSLEIETETT
SLQSPGPIWSECVFSMDSSISNISIPKKYYPQATDVDSSVPHALMTTLGSETSGGSVWLI
NLRGPLDRFDAGSLGRGMDEIFSLKSRIWSADSYSDGSRAVVGTNIGAALIDIETKRRRR
ICRSESDVISLQLDRSEKLVLCGLKSGAIVMVDTRQKCDKEWFGVMGNVHVPSPVSCLVA
LKHDDYFLAGSMDGTIRLYDHRLTQRGAVQLYEGNVNSHTRIQMGVDPSERFLMSGGEDF
YLRMWSINSGEMLYEDKFMNAVPSVLCWPRGDPECNRRPQNHFPGAWLGSGEGLFYVDTS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatatagcatcgaaatttttcaagagaattcatctcagggagttatgcggcaat
tcaattagatctaagaaagagaagggcaactttgaagctgaatgccaaaagttatgggca
tcaaagcctatggtttggaaatatccacagacagagagggattctgatactgcattggaa
cacgtatatgtcgacatgcagacacaagatggccttactaaatctgaaatgttgctaact
ggaagtcatagtaacatgtttcgttgttatgaggttggatatgcgaaatgggatggtatt
aaaggggaggagagtgtgcccgatcttttgcagtctttggagatagaaacagaaaccacg
tcactacaatcaccaggacctatttggagcgaatgtgtgttttccatggactcaagtata
tctaatataagtataccaaaaaagtattatcctcaagcaactgatgttgattcatcagtt
cctcatgctttaatgactactttgggatccgaaacatctggtggatctgtttggttgata
aaccttagaggtccattggatcgttttgacgctggctcgctgggtcgaggtatggatgag
attttttcactcaaatcgagaatatggtcggcagatagctattcagatggaagccgagca
gtagttggtaccaacattggagctgctttgatagatatagaaacaaaaagaaggagaagg
atatgccgttccgaaagtgatgttatttcgttgcaacttgatcgttcggaaaagcttgtt
ttatgtggacttaaaagtggtgctattgtgatggttgatactcgccagaaatgtgataaa
gaatggtttggggtcatgggaaatgtccatgtgccttcaccagtttcatgtttggtggca
cttaagcatgatgattatttcttggccggctccatggatggaacgataaggctatatgat
catcgtttgacacaaagaggagctgtacagctgtacgagggaaatgtgaactctcatact
cgtatccagatgggggtggacccatcagagagatttctaatgtcagggggagaagatttc
tatctgcggatgtggagtataaattctggggaaatgttatacgaagataaattcatgaat
gcggtaccatcagttctgtgctggccaagaggagaccctgagtgcaacagaagaccacaa
aatcatttcccgggggcttggttagggtccggggaagggctcttttatgtagatacatca
tga
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