Erigeron canadensis (horseweed): 122589995
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Entry
122589995 CDS
T07610
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122589995
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122589995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Glug
Motif
Other DBs
NCBI-GeneID:
122589995
NCBI-ProteinID:
XP_043618263
LinkDB
All DBs
Position
2:16550909..16558478
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AA seq
665 aa
AA seq
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MSSQLTPSKRPHNQSGSEPNGKGKLQKPAFFTSQNASFKVTPGSLVFRVLCLASKSGSVI
GKGGNKISQIRQESGAKIKVEETIPGCNERVIFISGSGDENGISDDPSKDVAVEEIKEIN
ESKEAEKDTNDAEKHESVAGEDLQSEKDVSSVQKALMLVFERMAEGDSETNGGDDVHNKE
FVIRLLVLSSQVASLLGKSGGPIKQMASKSGAQIQILPKDKLPSCASSSDELVQISGEVN
AVRKALQSVSQHLLDHPLCDNESFSANNSGQSHSFGGSLSQQDAYPSFPPQGGLLPAGSR
DGGSGTFGGRFGPFTDMLTYRLICPDEKVGGVIGKGGTIVKALKQETGCDIRVLEKIPES
DDRIIVISGPAHPEERICAPQDAVMRVQTRIFRAAPESKAMTAKVIVSAHQIGCILGKGG
AVISDMRKSTGAYIRILGKDLTPQYAAENEEVVQINGDYEAVHEALFQVTTCLRNHYFRD
AFPGFQDHGPPFPPFMGRRELSPSGRFSSFNRFDAGPPPHGGFHPHDDRPPFMHDRPDFP
HPMSERMPSSAPWGPQGLEGGGPLGYPDFGAPQRRMGGFVGGSHQAIITNTTVEVVVPRS
VVPSIYGEEGGCLKQIREISDAKITITDPKPGAKETLIIISGTPEQAHAAQSLIQAFVIC
ETEGS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaattaacgccttctaagaggccacataatcagagtggctcagagcccaat
ggaaaaggaaagttgcagaagccagcctttttcacttctcaaaacgcatcatttaaagtc
actccaggaagccttgtttttcgtgtgctttgtctggctagcaaaagtggaagcgttatc
ggaaaagggggcaacaagatatcacaaatacgccaagaatctggtgcaaagatcaaggtt
gaggaaacgattcctggttgcaatgagcgggtaattttcatatcaggatccggggatgag
aatggaatttctgatgatccgagcaaagatgttgccgttgaagaaattaaagagatcaac
gaaagtaaagaagctgaaaaagatactaatgatgcagaaaaacatgagtctgttgcgggg
gaagatttgcaatctgaaaaagatgtttcttctgtgcagaaggctttgatgcttgtgttt
gaaagaatggcggaaggagactcagaaactaatggtggggatgatgttcataataaagag
tttgttataaggttacttgtcctttcttctcaagtggcatcccttttgggaaaatctggt
ggtcctatcaaacaaatggcttctaaaagtggtgcacaaattcagattcttcctaaggac
aaacttccctcgtgtgcatcttcttctgatgaattagttcagatttctggagaagtgaac
gcggttagaaaagcacttcaatctgtttcacaacatcttttggatcatcctctttgtgac
aatgaatctttttctgccaataatagtgggcagtctcattcttttggcggttctctttct
cagcaagatgcatatccttcttttcctcctcaaggaggcctgttgcccgcagggtctcgt
gatggtggtagtggtacttttggggggcgttttggtcctttcacggacatgttaacgtat
cgtttgatatgccctgatgaaaaagtgggtggtgtaattggaaaagggggaactattgtg
aaggcacttaagcaggagacaggatgtgacattcgagtccttgaaaaaatacctgaatca
gatgaccggatcattgtcatatctggaccagcgcatccagaggaacggatatgtgctcct
caagatgcagttatgcgtgttcaaacaaggatatttagggctgcacctgaaagcaaggcg
atgacagcaaaagtcatagtttctgcacatcaaattggatgtatccttggcaagggcggt
gcagttatatctgacatgagaaagtcaaccggggcttatatccgtattttgggtaaggac
ctgactccacagtatgctgctgaaaatgaggaagtagttcagataaatggtgactatgaa
gcagttcatgaggctctttttcaagtaaccacatgcttgcggaatcactatttccgagat
gcatttcctggtttccaagatcatggcccaccatttccaccattcatgggaaggagggaa
ctttcgccatcaggaaggttttcctcttttaatcggtttgatgccgggccccctccacac
ggtgggtttcatccgcatgatgaccgacctccatttatgcatgatcgaccggactttccc
caccctatgtctgaaagaatgccatcttctgcaccatggggtcctcagggtttggaaggt
ggtgggcctttagggtatcctgattttggagccccgcaaaggagaatgggtggatttgta
ggaggaagtcaccaagctataattacaaacactactgtcgaagtggttgttcctcgtagt
gttgttccttctatatatggagaagaaggtggatgcttgaaacaaatccgagagatttct
gatgccaaaatcaccataaccgacccaaaacctggtgctaaagaaactttgattataata
tctggcacaccagagcaggctcatgcagcacagtctcttattcaagcttttgtgatttgt
gaaactgaaggttcttga
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