Erigeron canadensis (horseweed): 122590001
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Entry
122590001 CDS
T07610
Name
(RefSeq) DDB1- and CUL4-associated factor 4 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122590001
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
122590001
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GFIT
Motif
Pfam:
WD40
Gryzun-like
Motif
Other DBs
NCBI-GeneID:
122590001
NCBI-ProteinID:
XP_043618270
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Position
2:complement(10480163..10486315)
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AA seq
499 aa
AA seq
DB search
MPQELPGFYYDAEKNRYFPIKSPIPGAPPSTSASQKPTSISKKAKYGGNEIADKVVTMLH
VRELCGNSISSNKKKVNFENQYQKIRASKPIVWKYQETERDSDAALEHVYVNVQTRDGLT
ESEVLLTGGLNNMFRCYEVGSVMERDGIIGWEIVPDLLQPTNIEKQTASLKSPGPVYSPH
LFQMGSNISCIKIPRNYDPQATDVDSSVSHALMTTLGSETSGGSVCLMNLSEPLDLGRRI
DEISVFKSTIWTADSYSDGSRAVVGTNIGAALVNIETGRKSWICRSKSDVLSLQLDYSGK
LVLCGLRNGAIVTVDTRQKPQDLHAGCPKHEISFPSIKTGKSNSARGQKRDKQWFEVRGN
VDHSRMIFMPSSISCLVALKLYDQYFLASSMDGTMRLYDHRLTQRGAVQLYEGNVNSHTR
IQMGVDPSERFLMSGGEDFYMRMWSIKSGEMLYEDKFMNSVPSVLCWARGGPDCNRGPKN
HLPGAWLGSQEGLFYVNTS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagagcttcccggattctattatgatgctgaaaagaacaggtatttccctatt
aaatcccctattcctggtgcccctccttccaccagtgcttctcaaaaaccaacctcaatt
tccaaaaaggcaaaatatggagggaatgaaatagcagacaaagttgttacgatgcttcat
gtgagggagttatgcggtaattcaatcagctctaacaaaaagaaggtcaactttgaaaat
caataccaaaaaatacgggcatcaaaacctatagtttggaaatatcaagagacagagagg
gattctgatgctgcattggaacacgtatatgtcaacgtccagacacgggatggccttact
gagtctgaagtattactgactggaggtcttaataacatgtttcgttgttatgaagttgga
tctgtgatggaacgagatggtattatcgggtgggaaattgtgccagatctattgcagcct
acaaatatagaaaaacaaactgcatcattaaagtcaccaggacctgtttatagtccacat
ttgtttcagatgggctcaaatatatcatgtataaagataccaagaaactatgatcctcaa
gcaactgatgttgattcatctgtttcacatgctttaatgactaccttgggatccgaaaca
tcaggtggatctgtttgtctaatgaatcttagtgaaccattggatttgggtcgaagaatt
gatgagatttctgtattcaaatcaacaatttggacagcagatagctattcagatggaagc
cgagcagtggttggtaccaatattggagctgccttggtaaatatagaaacaggaagaaag
tcatggatatgccgttccaaaagtgatgttttgtctctgcaattggattattcgggaaag
cttgttttatgtggactccgaaatggtgctattgtgacagttgatactcgccagaaaccc
caagacttacatgctgggtgtcctaaacatgaaatctcttttccatctattaaaactggc
aaatctaacagtgcaagaggtcaaaaacgtgataaacaatggtttgaggtcaggggaaat
gtcgatcactctcgaatgatctttatgccttcatcaatttcatgtttggtggcacttaag
ctttatgatcagtattttttggccagctctatggatggaacgatgaggctttatgatcat
cgtttgacacaaagaggagctgtacagttgtacgagggaaatgtgaactctcatactcgt
atccagatgggtgtggacccatcagagagatttttgatgtcagggggagaagatttctat
atgcggatgtggagtataaagtctggcgaaatgttatacgaagataaattcatgaattca
gtgccatcagttctgtgctgggcaagaggaggtccagactgcaacagaggacctaaaaac
catctcccgggggcttggttagggtctcaggaaggtctcttttatgtaaatacttcatga
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