Erigeron canadensis (horseweed): 122590057
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Entry
122590057 CDS
T07610
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
122590057
Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
122590057
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_10
TPR_NPHP3
SET
TPR_MalT
zf-MYND
TPR_11
Motif
Other DBs
NCBI-GeneID:
122590057
NCBI-ProteinID:
XP_043618324
LinkDB
All DBs
Position
2:complement(27588882..27596031)
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AA seq
774 aa
AA seq
DB search
MEKLKSRIPETLIHSISQSNPNTLPNTCSSLHDFLNQLPLFHQMIEDLVHKETSLFLKNK
QSALEFKLKGNNSFTSGDYPNALRFYSQALRVAPTDVEDKGKNLVATLYVNRAAVLLKMG
LVKESLRDCNRALAVCKSYSKAWYRRSKANTSMGNFDDAVCDLKVSLCTELSVSGKRQIE
GELKLILAQHHRKDSSPDVPIYDESNILDQLPQIQLQCVSTESKGRGMVSLTDIPQTTLL
HKEEPLAAIVSKHCRETYCHFCFIELPADTVPCPSCSMALYCSRLCQLHARGYDSHTNMN
NHGKIGVDLSRDLEKYVASVTRDTVDVMHNKQTVEHKHECGVNWSAALPAEVVLAGRVIG
KFIEEHRHIGESSSIVSLELCHNYLQLDPESKLELHISSIVLLKCLHKFYGSDVSLKGDT
ISQCVLLLSQLNVNSMAIVRMRSADTVGLPSSIGNHTTTAVEQVRVGQAIYLGGSLFNHS
CQPNIHTYFFSRTLYIRAINFVTAGHPLELSYGPQVGQWSCNERKSSLKEQYGFVCSCTS
CSQLNISDLFINSFRCVNPNCPGVIMYSSVVDYENQKVNPFLCGSQRQVDRFEHDEVKRV
ASLLCQDTTSANCIKPGVCLSCGTYRDLEASNAVVEKAEISIRRLMDSLASAQLPTNILS
SAVRSLDLLKSVLHPYNKKVAEVEDYLAQAYTSIGELKQARDRCQASIKILEKLYGHDHI
VIGNELVKLASIQLSLGKSAAGETINLINLIFSRHYGSDVEVMFPHLQFLKYGL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactgaaatcaagaattccagaaaccctaattcactcaatttcacaaagcaat
ccaaacacactcccaaacacttgttcatctctccatgatttcctcaatcaattacccctt
tttcaccaaatgattgaagatttagttcacaaagaaacatcactgtttcttaaaaacaaa
caatctgcgttagaatttaagcttaaaggaaacaattcctttactagtggagattaccca
aatgctttgagattttactctcaggctttacgagttgctccaacggatgtggaggataag
ggaaaaaacctggtggctacgttatacgtaaatcgcgcagctgtattgctgaaaatgggt
cttgttaaggagtctctgcgggattgtaatcgcgctcttgcagtatgtaaaagttactca
aaggcatggtatagaaggagtaaggcaaacacttctatgggaaattttgatgatgccgtt
tgtgatttgaaagtttcactatgcacggagctctctgtaagtggaaagcggcagatagaa
ggcgaacttaaacttatcttagctcaacatcaccggaaagactcctcgccggatgtacct
atatatgacgagtctaacatccttgatcagctaccacaaatccaattgcagtgtgtttct
acagaatcaaaagggaggggcatggtgtctttgacagacatacctcaaactactttgctt
cataaagaagaaccacttgctgcgatagtatcgaagcattgtcgggagacttattgccat
ttttgctttattgaactaccagccgataccgttccatgtccatcatgttcaatggcttta
tattgttctagactctgccagttacatgctagaggatatgattcacacacgaatatgaat
aatcatggaaaaattggtgttgatctgtctcgtgatcttgagaagtatgttgcaagtgtc
actagagatacggttgatgttatgcataacaagcaaactgtcgaacataagcatgaatgt
ggagtaaattggtctgccgcgttaccagccgaagttgttttggctggtagagttataggg
aagttcatagaggagcataggcatattggtgaatcttcctctattgtgagtttggagctt
tgtcacaattatctacaacttgatccagaatccaaactggagctgcacatatcttccatc
gttcttttgaagtgtcttcacaagttttatggctcggatgtttcattaaaaggggacact
atttcacagtgcgtcttacttctctcacaactgaatgtgaactctatggcaattgttcgt
atgagatctgctgatacagttggtctaccaagctcaatagggaatcatacaactactgct
gttgaacaggtcagggttggtcaagctatttatttaggtggaagcttgttcaaccattct
tgtcagccgaacattcatacatatttcttttctcggaccctatatatacgagcaataaat
tttgtgactgctgggcatccactggagctctcttatgggccgcaggttggccaatggagt
tgtaacgaacgcaagtcatctttgaaagagcaatatggctttgtatgttcgtgcacgagc
tgttcacaattgaatatatctgaccttttcataaactctttccggtgtgtaaatccaaat
tgccctggtgtaatcatgtatagttccgtggtcgattatgaaaatcagaaagtcaaccct
tttctttgtggttcacaacggcaggttgatcgatttgagcatgatgaggtcaaaagagtg
gcaagccttttgtgtcaagacactacctcggctaattgtattaaacctggggtttgtttg
agctgtggtacttaccgtgacctggaagcttcaaatgcagtagtagaaaaggcagagatc
agtataagaaggttgatggattcattagcttctgctcaattgcctacaaacatactttcg
agtgctgtaagatctttagatcttctgaaatcagtgttgcatccatacaacaagaaagtt
gctgaggtagaggattacttagcgcaggcgtatacttcaattggagaactaaaacaggca
cgtgaccgatgtcaagcatccatcaagatactagagaagctttatggccatgaccacatt
gtcattggaaacgagttagtgaaactagcatcaattcaactgtctttgggaaaatctgct
gctggagaaaccataaatctgatcaatttgatattttcacggcactatggctcagatgta
gaggtcatgttccctcatctacaattcctaaagtacggcctctaa
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