Erigeron canadensis (horseweed): 122590077
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Entry
122590077 CDS
T07610
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122590077
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122590077
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122590077
NCBI-ProteinID:
XP_043618348
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Position
1:complement(32406603..32409135)
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AA seq
578 aa
AA seq
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MTCSNLFIYMLLICLSFTFNRTLALLPHQHPDPEAIVLQLQRKINASITSRRRLLETQPI
FTRSKDQIPCQTGNPIDDCWRCDPNWANDRQRLADCAIGFGQGAMGGKGGQIYVVTDSSD
GNPENPSPGTLRHAVIQSEPLWIIFANDMHINLKNELIVSSSKTIDGRGAIVHVTGKGCI
VIENVGNIIIHGLYIHDCEPSGKAKIRVSPTDVVGRGKSDGDGLTVRGVRNLWIDHCSFA
RCTDGLVDITEGSTAVTVTNSYFTDHDKVMLLGHSDDYLADAGMQVTVAFNHFGKGLVER
MPRCRHGYFHVVNNDYTEWQLYAIGGSAAPTINSQGNRFVAMPNSHKEVTKRMEAKEDEW
KGWNWRTEGDLMVNGAFFVPSGAEFSVQYAKASSVPPMSAYLINQLTMHAGVLVGPASNV
GENPPPGDGPPLITPPLDGQPNGGNPNFPPGTIPPDGGGYGYPPGTILPGVNTYGTMPPG
CFAHENIPGGGCIPGNTQYGDPGMNPGGYGSGSPPPGVLQGCGPGIIPYCGGPGSRRFSG
GSGSIQTLAHSSISINIFLSSLVVLSLHTPIPPVLYFH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacatgctctaatcttttcatctacatgcttttaatttgtctatctttcacttttaat
aggacactagcattgctccctcatcaacaccctgaccctgaagccattgttctacaacta
caaaggaaaataaatgcttcaatcacctctagaagaagattacttgaaacacagccaata
ttcactcgatcaaaagaccaaattccttgtcagacaggaaacccgattgacgattgctgg
agatgtgacccaaactgggccaatgaccgtcaacgccttgctgactgtgctatcggattt
ggtcagggtgcaatgggtgggaaaggaggccaaatatacgttgtcacagactcatctgat
ggtaatccagaaaacccatctccaggaacactaagacatgctgtcatacaatctgaacct
ctatggatcatatttgccaatgacatgcacattaatctgaaaaatgagctcattgtgagc
agctcaaaaaccattgatggccgtggagctatcgtgcatgtgaccgggaaagggtgcatt
gtgatagagaatgtggggaacatcatcattcatggcctctacatccacgactgtgaacca
tcgggaaaggctaagatacgggtgagtccaacagacgttgtgggcagaggcaaatcagac
ggtgatggattgacggtcaggggggtaagaaatttgtggattgaccattgttcttttgcc
aggtgtaccgacggactggtggatatcacggaaggatcaacagccgtgacagttaccaat
tcatattttacagatcatgataaggtcatgttattgggtcattctgatgactacttggca
gatgccggcatgcaggtgactgtagcattcaatcactttgggaaagggcttgtggagaga
atgccaagatgccggcatggatatttccatgtcgtaaacaatgactatactgaatggcag
ttgtatgctattggcggaagcgctgctcccaccatcaatagtcagggcaacagatttgtt
gccatgcctaattctcacaaagaggtgacaaagcgaatggaggcaaaggaggatgaatgg
aaggggtggaactggaggacagaaggggacttaatggtcaatggtgctttctttgtgccc
tcgggtgcagagtttagtgttcagtatgccaaggcttccagtgttccaccaatgtctgcc
tatctcataaaccaactaactatgcatgccggtgtacttgtaggccctgcaagcaatgta
ggtgaaaatcctccacctggtgacggtcctccactgattactccacctctagatggtcaa
cctaatggtggtaaccctaactttcctccaggaaccataccacctgatggtggcggctat
ggctacccgccggggacaatactgccaggtgtcaacacttatgggaccatgccaccaggt
tgttttgcacatgaaaacatacctggtggcggttgtattcctgggaacacacaatatggt
gatcctgggatgaatcctggtgggtacgggtcaggatcaccaccacctggggtgctacaa
ggttgtggacctggaataataccttattgtggtggtcccggcagcagaagattttcaggt
ggatctggaagcattcaaacattggcacattcttcgatatcaatcaacatatttctgtcc
tccctagttgtattatcattgcacacgcccattcctccagtgctctattttcattaa
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