Erigeron canadensis (horseweed): 122590144
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Entry
122590144 CDS
T07610
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122590144
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122590144
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122590144
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
122590144
NCBI-ProteinID:
XP_043618416
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Position
2:8772762..8777891
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AA seq
569 aa
AA seq
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MNERMKIATYNVNGLRPRIAQYGSLRKLLDSLDSDIICIQETKLSRQELRADVVTADGYE
SFLSCTRSIEKGRTGYSGVATFCKVQSAFSTTEVALPLDAEEGFTGVLENSKGFGIRKHG
SVAAVEGLEGFDRDELVRIDSEGRCVITDHGHFVLFNIYGPRAAHDDAERIEFKLSFFKI
LQKRWEALMLKERRIIVVGDLNIAPSSIDRCDAGPDFENNEFRSWFRSLLVGNGGFFYDV
FRTKHPERTEAYTCWSTNTGGEIFNFGSRIDHILSAGSCLHESKNLEGHDFVSCHVNDCD
ILTQFKRCKPGATPSYRWKGEKNIKLEGSDHAPVFVSLTDIPEIPQHNTPSLSTRYCPQV
RGCQQTLVSMLSRRQSTEEVGARENDATSLDEENRVQNCEQHVKSPIRDNSEMRKKSKKN
QSSQLSLRSFFSTATSNKDTTSTTVDTSLTHTSNSLEGTETQISEESVSIRSEPDQPECE
SDAGNSSQTDKSKIAQLEWQRIQLFMQNSIPVCKGHSEQCVSRVVKKAGPTFGRRFYVCA
RAEGPSSNPEANCGYFKWADSGSKRKNGK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacgaatgaagatagcaacgtataacgtgaacggcctaaggcctcgaatcgct
cagtacggttctctccgcaaactcctcgattctctcgattccgatatcatctgcattcag
gaaacaaagttatcaagacaagaactgcgagctgacgtcgtaacagcagacggatacgag
tcattcttatcttgcacccgctctatcgaaaaaggccgaaccggttattccggtgttgct
acattttgcaaagtgcaatctgctttttcgacgactgaagttgcactgccccttgatgcc
gaagagggtttcactggtgttttagagaattctaaaggatttgggattagaaaacatggt
tctgtggctgctgtggaagggctcgagggatttgatagagacgagcttgttaggattgat
agcgagggacgttgtgttattactgatcatggtcatttcgttcttttcaacatttatggg
cctagagctgcacacgatgatgctgaaagaattgaattcaagctctcatttttcaagata
ctgcagaaacgatgggaggctctcatgcttaaagaaagaaggataattgttgttggtgat
ttaaacattgctccttcttcaatagataggtgtgatgcaggacctgattttgagaataac
gagttcagaagctggtttagatctttacttgtgggaaatggaggcttcttttacgatgtg
ttcaggacaaaacaccccgaaagaacagaagcctatacttgctggtccacaaacacaggt
ggcgagatatttaatttcgggtcaaggatcgaccatattctaagtgctggttcatgctta
catgaaagtaaaaatcttgaaggtcatgactttgtgtcgtgccatgttaatgactgtgac
atattaacacaattcaaacggtgcaaacctggggccacgccgagctacagatggaaagga
gagaaaaacatcaaattggaaggttcagatcatgccccagtctttgtgagtttaacagat
attcccgagattccacagcataatactccgtctttatccactagatactgtcctcaggtt
cgaggatgtcagcaaactcttgtgtcaatgttatcaagaaggcaatcaacagaggaagtt
ggagcccgtgaaaacgatgctacttctcttgacgaggaaaatagagtgcaaaattgtgag
cagcatgttaaaagtccaattcgtgacaatagtgagatgaggaaaaagtcgaaaaagaat
caatcgtcacagctctcacttagatcatttttcagtactgcaacgtccaataaagatacg
acgagtactactgttgatacttctcttacccataccagtaattctcttgaaggcactgaa
actcaaatttcggaagaatctgtgtccattagaagtgaaccggatcagcctgaatgtgaa
tcagatgctggtaattcttcacaaactgataagagtaagattgctcaattagaatggcaa
agaattcaactgttcatgcagaatagcatacctgtatgcaagggacatagtgaacaatgt
gtttctcgggtcgtcaagaaagcaggacctacttttgggcgccgattttatgtctgtgct
cgtgcagagggaccgtcatctaatccggaagcaaattgtgggtactttaagtgggctgat
tcaggatctaaacgtaaaaatggcaaatga
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