KEGG   Erigeron canadensis (horseweed): 122590293
Entry
122590293         CDS       T07610                                 
Name
(RefSeq) F-box protein SKP2A-like
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122590293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122590293
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122590293
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 F-box-like F-box LRR_NXF1-5 PRANC LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 122590293
NCBI-ProteinID: XP_043618554
LinkDB
Position
2:complement(20730311..20738046)
AA seq 363 aa
MMEGKGDDELNICLENMVVFGDGDSSSIKEINNEWKDIPMELLLRIVSLLDDEQSVIIVS
SVCSGWKDAISRGLSHLSLSWCKRNMNSLVLSLVPKFTNLRVLSLRQDQPQLFDNGVETV
ANSCHDLEDLDLSKSFRLSDSSLYALAHGCPNLIKLNISGCSAFSDTALAYLTGFCRKLR
ILNLCGCVKAASDKALKAIGNNCSHLQSLNLGWCENVSDDGVMSLAYGCPNLRALDLCGC
VLITDESVIALADNCVHLHSLGLYYCQNITDRAMYALAQSRVKNRLQVLESVKEEGLQRL
NISQCTALTPPAVQALCNSCPALHTCAERHSLIISGCLNLTSVRCACAFQPHRQLKAFSR
QAY
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgatggaaggtaaaggtgatgatgaactgaacatctgtttagaaaatatggtggtgttt
ggagatggggatagtagtagcattaaggaaatcaataatgaatggaaggatataccaatg
gagctattgttgagaattgtatcattgttagatgatgagcagagtgttataattgtttct
tctgtttgtagtggatggaaagatgctatttccaggggtctttcccatctttcactttct
tggtgcaaacgcaatatgaatagcttggtgctttctcttgtacccaagtttacaaatttg
agggtgttgagccttcggcaggatcaaccgcaactttttgataatggtgtcgaaactgtt
gcaaatagttgccatgatttggaggatcttgatttgagcaagagctttagacttagcgat
tcgtctctttatgcgttagctcatggctgtccaaatcttatcaaactcaatattagtgga
tgctctgccttcagtgacactgctctagcttatctcactggtttttgcagaaagttgaga
attcttaacctttgtggatgtgtaaaagctgcatctgacaaggcgttaaaggctattggg
aataattgtagtcatctacagtcgcttaatcttggatggtgtgaaaatgttagtgacgat
ggagtaatgagtttagcgtacgggtgccccaatctacgtgctcttgacttgtgtggttgt
gtgcttataacagatgaaagtgtgatagctctggcagacaactgtgttcatctacattct
cttggtttatactactgccaaaatataaccgacagagccatgtatgctttggctcaaagc
agagtaaaaaaccgactccaagtattggagtcagtcaaggaagaagggctccaaaggctt
aatatcagccagtgcacagctctaaccccacctgctgttcaagcactttgcaattcttgc
cctgctctacacacgtgcgcagaaagacattcactaatcataagtggctgcttgaatcta
acctccgtacgttgtgcttgtgcatttcaaccacaccggcaactcaaagcgttttctcgt
caagcttattaa

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