Erigeron canadensis (horseweed): 122590476
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Entry
122590476 CDS
T07610
Name
(RefSeq) WD repeat-containing protein 13
KO
K24739
WD repeat-containing protein 13
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
122590476
Domain-containing proteins not elsewhere classified [BR:
ecad04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
122590476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_EML
KNTC1_N
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Vps41
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_EMC1_N
Beta-prop_IFT122_1st
WD40_RFWD3
CPSF_A
Beta-prop_SPT8
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
122590476
NCBI-ProteinID:
XP_043618613
LinkDB
All DBs
Position
3:complement(30329693..30336707)
Genome browser
AA seq
492 aa
AA seq
DB search
MAGDQKTIDDNKSRSSEVDAINQENNNNNKSNKNDDITDPETFSCVLQPCPPRSDPNYIG
IRRLLLFRKAQAGVLRRKDWRCNGKGYVAYRNFINRPENWLNMPSHTSTPGTSGRWLSSP
SQLSLALEMESWAGSRDQPESQTLSRTVSLGANSSDYEHPRRKAEPAYSFVGMHCIFDEC
KSMVTVIKFGHMSSDILAYGATDGTITVCTVSEPPSIMKKLTGHSKDVTDFDFSLNNQYI
ASSSLDKTVRVWDIPKGLCIRVIYGVTSQLCLRFHPVNNNFLTVGNANREISVFNFSTGR
LISKIVADSEVPALDYDHTGQFVFCGDVQGSIYTLKVNSHQGTLSRSHRTRTSSKNKSEF
TTIQYRTFSLMTQGPVLLSLTRDGSLSFFSVSLELQGYLTIRCSLKLAPRLHSIRASFCP
LLSLEKGEYIVIGSEDAAVYFYDLTRPKNTCVNKLQGHGYPVIAVAWNHGENLLASSDFG
GTVIVWKREKTK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagatcagaaaacgatcgatgataacaaatctcgttcttctgaagttgatgcg
ataaatcaggaaaataataataataataaaagtaataaaaatgatgatataaccgatcca
gaaactttcagttgtgtccttcagccgtgtccgcctcgttccgatcctaattacatcggt
attcgacgtctccttttgtttcgtaaagcgcaagccggcgttcttcgccgtaaggattgg
agatgtaacgggaaaggttatgtggcttatcgtaatttcattaacagaccagaaaattgg
ttgaatatgccaagccacactagcacacctggaaccagtgggcgatggctgtcttctcca
agtcaactttctcttgcacttgagatggaaagctgggctggtagcagggatcaaccagag
agtcaaacactgagtcgtactgttagtttaggtgcaaattcaagtgactatgaacaccca
cgtcgaaaggctgaacctgcatattcttttgtggggatgcattgcatctttgatgaatgc
aaatctatggttactgttataaagtttggccacatgagttctgatatacttgcctatgga
gcaacagatggaacaattacagtttgcaccgtctctgaaccaccttcgattatgaagaag
ttgaccgggcactcaaaagatgtcacagattttgacttctcgttaaacaaccaatacatt
gcatcgtcttcactggacaaaactgtgagagtatgggatattccaaagggactttgtatt
cgagtaatatatggagttacctcccagctttgtcttcgatttcatcctgtgaataataac
tttctcactgtcggcaacgcaaacagagaaatatcggtattcaattttagtacaggaagg
ttaataagtaagatagttgctgacagcgaggttcctgcccttgattatgaccatactggc
cagtttgtcttttgtggcgatgtacagggatctatatatacactaaaagtaaactctcat
caaggaaccttgtcccggtctcatcgcacaagaactagcagcaagaataaatctgaattc
acaaccatccagtatagaacgttttctctgatgacacaaggtcctgttttactttcactc
acgcgagacggaagcttgtctttcttcagtgtttctttggagctccaagggtatttgacc
atacgatgttcccttaagttggctccacgacttcacagcatacgtgcttctttttgccca
ttgctttcccttgaaaaaggagaatatatagttattggaagtgaggatgcagctgtttac
ttctatgacttaactaggcccaagaatacatgtgtcaacaagctgcagggacatggatac
ccagtgattgctgttgcatggaaccatggtgagaatttgttggcatcctctgattttggt
ggcactgtaattgtgtggaagagagaaaaaacaaagtaa
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