Erigeron canadensis (horseweed): 122590698
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Entry
122590698 CDS
T07610
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122590698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122590698
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122590698
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
122590698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122590698
NCBI-ProteinID:
XP_043618813
LinkDB
All DBs
Position
3:complement(29087514..29095303)
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AA seq
1072 aa
AA seq
DB search
MEIAPPADDGIAIIPDSSPSSSASGPCASTAVLNTNNNNNNNNDYDDEDEDGDVCRICRN
PGDDDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARHCEVCKHPFSFSPVYAENAPSRLP
FQEFIIGMAMKAYNVVKFFARLSFVLSVWLLIIPHITFWIWRFSFVRSFGEAQRLFLSHI
STTFILTDCLHGFLLSASIVFIFLGATSLRDYFRHIRELGGAEADREDEGERNGARVARR
QPAQANRNLIGDGNVEDVGGRGIGGAGQMIRRNAENVAARWEMQAARLEAHVEQMFDGLD
DGDGAEDVPFDELVGMQGPLFHLVENAFTVLASNMIFLGVVVLVPFHLGRFILYHLSWVL
SSATTPMLSTVVPLTEHALSLANITLKNALTAVTDLASEKSSADMINVNATGLNESPNNV
TNLVSVEFLKGAISGVSRLSDATTLAVGYMFIFSVIIFYLGVVALVRYTRGEPLTLGRFY
GIASIAETIPSLFRQFLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSI
GERVDFFSVSPLASSLIHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFR
DLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPAD
MLLFQICIPFAVEHFKLRATIKSLLHYWFTAAGWALGLTDYLLPRPEDTGGQDNENDLVR
GQDRDVVGYIPPEDLNRARHAAANTNFAEEADGDEQSDSERYMFVLCIVLLLLAAWMTLL
IVNSALIVVPVSLGRVLFNAVPLLPITHGIKCNDIYAFVIGSYVIWTLVAGIRYCMDQIR
TRRASVLLGQIWKWCSIAVKSSVLLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLL
YQDWALGLIFLKIWTRLVMLDHMMPLMDDSWRVKFERVREDGFSRLQAFWVLREIVVPII
MKLLTALCVPYVLARGVFPVFGYPLVINSAVYRFAWLGCLGLSLLCFCAKRFHVWFTNLH
NSIRDDRYLIGRRLHNFGEVNNDRQQEVETSNDDAGDNDVGLRHRRGIPVDG
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcaccgccggcagacgacggaatcgcaatcataccggattcatcaccgtct
tcttcagcatcaggtccttgcgcttcaactgctgttttaaatactaataataataataac
aataataatgattatgatgacgaagatgaagacggagatgtttgccggatctgccggaat
cctggtgacgacgataatccgctgcggtatccgtgtgcttgtagcggaagtattaaattt
gttcatcaggattgtcttttacagtggcttaatcatagtaacgctcgtcactgcgaggtc
tgtaagcatcccttttcattctctcctgtgtatgctgagaatgctccatcaaggcttcct
tttcaggaatttatcattgggatggcaatgaaagcctataacgtggtgaaattcttcgcg
agactcagttttgtgctttctgtatggctcttgatcataccacatattaccttctggata
tggcgcttctcatttgttaggagttttggagaagctcagagactgttcttgagtcatatc
tctaccacatttattcttacagactgtcttcatgggtttttactctcagcaagcatagta
tttatttttctcggtgccacatctttgcgggactatttcagacacatacgcgaacttgga
ggcgcggaagcggacagagaggatgaaggagagaggaacggtgctcgtgtagctagaaga
caacctgcacaagccaatcggaatcttattggtgatgggaatgttgaagatgttggagga
cgaggcattggtggggctggtcagatgatcaggaggaatgcagaaaatgttgcagcaagg
tgggagatgcaagcagctcgtcttgaggcacatgttgaacagatgtttgatggtttggat
gatggagatggtgcagaggatgtcccttttgatgagctggttggcatgcagggacctctc
ttccatttggtggaaaatgcattcactgttcttgcaagcaacatgatatttcttggtgtt
gtagtacttgtgcctttccacctaggacgatttattctctaccatctatcatgggtttta
tcatctgctactaccccaatgttatcgactgttgtaccacttactgagcatgccctttct
ttggccaatattacattaaagaatgcgttgactgcagtcacagatttggcatctgagaaa
agttctgcggatatgataaacgtgaatgccactggacttaatgagtcaccaaacaatgtt
acaaatctagtttcagtggagtttctaaaaggggcaatttctggggtatcacggctctct
gatgctacaactcttgcagttggctatatgttcattttctcagtaattatcttttatctt
ggagttgtagcactggttaggtacaccaggggggaaccattgactttgggaagattctat
ggtattgcttcaattgctgagacaatcccttcactgttcaggcagtttttggccgcaatg
agacatttaatgactatgataaaggttgcatttcttttggtcattgaactgggagtcttc
cctctaatgtgtggatggtggctagatgtttgtacaataaggatgtttggaaagtcaatt
ggtgaaagagttgacttcttttctgtttctccactcgcaagctcattgattcattgggtt
gtagggattgtctacatgctacaaatatccatatttgtcagtcttcttagaggggttctg
cgcaatggagtcctttatttcctgcgagatccagctgaccctaactacaatccatttaga
gatctaattgatgatcctgtgcacaagcatgcacgcagggttcttttgtcggttgctgta
tatgggagcttaattgtaatgctggtatttttgcctgttaaacttgcaatgcgcatggct
ccgtctatctttccgcttgatatatcagtatctgacccattcacggagattcctgctgac
atgcttctcttccaaatttgcattccttttgccgttgagcattttaagctgcgtgcgact
attaagtcacttctgcactattggtttactgcagctggctgggcccttggtttaactgat
tatttattgcctagacctgaggatactggtggacaagataatgaaaatgatctagtaaga
ggacaagatcgagatgttgttggatatataccccctgaagatttgaaccgagcaaggcat
gcagcagccaatactaattttgcagaagaagcagatggtgatgaacaatccgattcagag
aggtatatgtttgtcctttgtattgtgctgcttttattggctgcctggatgacattgctg
atagtcaattctgctctaattgtggtgcctgtatcccttggacgagtgctcttcaatgct
gttcctcttcttcctatcacacatggcatcaaatgcaatgacatatatgccttcgtcatt
ggaagttatgtcatctggaccttagtggctggcataaggtattgcatggatcaaattaga
acaaggagagcttcagttttactaggtcaaatttggaaatggtgttctattgctgtaaag
agctctgtactgctgtcaatttggatttttgtcattcctgttttgattgggctgctattt
gaacttctggtaattgtaccaatgagggtgcctgtggacgaaagcccagtgttcctgttg
taccaagactgggctcttggacttatatttctcaagatctggactcggctggttatgctg
gatcatatgatgcctctaatggacgacagttggcgggtaaagtttgagagagtaagagaa
gatggtttctctagactacaagccttttgggttctacgagaaattgtggtccccatcatt
atgaagcttcttacagctttatgtgtcccctatgtgttagcccgaggagtatttcctgta
tttgggtacccgttagtgatcaactcagctgtctacagatttgcatggttgggttgcctt
ggtctcagtttgctgtgtttttgtgccaagaggttccatgtctggtttaccaacctacat
aactcgataagagatgaccgctatttgattggacgaagacttcataattttggggaagtt
aacaatgacaggcaacaagaggttgagacttcaaatgacgatgcaggagacaacgatgta
ggtttgaggcatagacgcggtattccagtggatggctaa
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