Erigeron canadensis (horseweed): 122590807
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Entry
122590807 CDS
T07610
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122590807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecad04040
]
122590807
Ion channels [BR:
ecad04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122590807
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
122590807
NCBI-ProteinID:
XP_043618910
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Position
3:complement(11326885..11335377)
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AA seq
735 aa
AA seq
DB search
MFNSAAKSQYVGGQKEKFVRLDDLDSRLSSPASSVGMNKCGFDGLTRSRHAPTAPTRSFK
NGIKKGSEGLKSIGRSLGFGVSPAVFPEDLKVSEKKILDPQDKFLLMWNKFFVVSCILAV
SIDPLFFYLPVFDKTKTCLGIDRKLAIIATTLRTVVDAFYLIHMALEFRTAYIAPSSRVF
GRGELVIDPGQIAKRYMRWYFIIDFLSVLPLPQFVIWRYLQRSKGSDVLATKEALRFIVL
IQYVPRFARIVPLTSELKRTAGVLAETAWAGAAYYLLLYMLASHIVGALWYLMSVERNNT
CWKKACKTSKHDTDFLYCGNEYMTGYNSWISNSTAILKEGCSPEGDNPPFDFGIFNQALS
SGIVFSTKFVQKYCYCLWWGLQNLSTLGQGLKTSTYPGETIFSIALAISGLILFALLIGN
MQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPEDLQERVRRYDQYKWLETRGVDEENLVQ
TLPKDLRRDIKRHLCLALVKRVPLFENLDERLLDAICERLKPCLYTDSSYIVREGDPVDE
MLFIIRGRLESITTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGANLPSSTRTVKAL
REVEAFALPADELKFVATQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIL
EQRRKEEEEEEEAAQAARNSTASSGTSYSLGATFLASKFAANALRGVQRNRNLRTARELV
KLQKPPEPDFTADTD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatagtgcagcgaagtcccagtatgttggtggccagaaagaaaagtttgtaagg
ctggatgatttggattctagattatcatcacctgcttcttcagttgggatgaacaaatgc
ggatttgatgggttaacccgttcaagacatgcacctactgccccgacaagatctttcaaa
aatggaataaaaaaaggatcagaaggactaaaatcaattggtcgatcacttggatttggg
gtttctccggctgtgttccctgaagatcttaaagtgtcagagaaaaaaatcttagaccct
caagataaattcctcttaatgtggaataaattctttgttgtctcgtgtattctggctgta
tctattgatccactgttcttctatcttccggtatttgataagaccaaaacttgccttggt
atagatcgaaagctagctattattgctacaacattgaggactgttgttgatgctttttat
cttattcacatggctcttgagttcagaactgcttatattgctccatcatcacgtgttttt
ggacggggtgaacttgtaattgatccaggacaaatagctaaacgatatatgcggtggtat
ttcatcattgatttcctttctgtgctgcccttgccccagtttgttatctggagatatctg
cagaggtctaaaggttctgatgtcctagctacaaaagaagccttacgttttattgtgtta
attcagtatgtcccaagatttgctcgaattgtcccattaacttcagaactgaaaaggacc
gctggtgttcttgcggaaactgcttgggctggggcagcttattatttgttgctgtacatg
cttgctagtcatattgttggggctttgtggtatttgatgtccgtagagcgtaataataca
tgctggaagaaagcttgtaaaacaagcaaacatgatacagatttcttgtattgtggaaat
gagtacatgactggttataatagctggattagcaacagtaccgctattttaaaggaaggt
tgctctccagagggtgataacccgccatttgattttgggattttcaaccaggctttgtca
tcgggcattgttttttctacaaaatttgtgcaaaagtactgctactgtttgtggtggggg
ctgcagaatttgagtactttgggacaggggcttaaaaccagcacttatcctggagagact
atattttctattgcacttgccatatccggcctcattctatttgctctattgattggcaac
atgcagacatatcttcaatctttaaccattcgacttgaagagatgagagttaagaggcgt
gactcagagcaatggatgcatcatcggttacttccggaggatcttcaggagcgtgttaga
cgttatgatcaatacaagtggttagaaactcgtggtgttgatgaagagaatttggttcaa
actctgccaaaggatctcaggagggacatcaagcgtcatctttgtcttgctttggtcaaa
agggttcctctatttgagaacttggacgagaggctgctggacgccatttgcgaacggcta
aaaccttgtttatatactgatagtagctacatcgtccgtgaaggagatccagttgatgaa
atgcttttcatcatacgtggccgtctagagagtattaccactgatggtggcagaagtggg
ttcttcaaccgtagtttgttgaaagaaggagacttctgtggtgaggagcttctgacctgg
gcactggaccctaaatctggtgctaatcttccgtcttccacaagaacagtgaaggccttg
agagaggttgaagcttttgccctaccagccgatgagctgaaatttgttgccacccagttt
cgacgactacacagccgacaggttcaacacacttttaggttctactcccagcagtggcgg
acatgggctgcttgtttcattcaggcggcctggcggagatactcgaagaggaagatattg
gagcagcgacggaaagaggaagaagaagaagaggaggcagcacaagcagcacgtaacagt
acagctagtagcggaacctcttacagccttggggctaccttcttggcttcaaagtttgca
gctaatgctcttcgtggggtccaacgtaatcgaaacttgaggactgctagggaattggtg
aaactgcaaaagcctccggagcctgattttactgctgatactgattag
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