KEGG   Erigeron canadensis (horseweed): 122590816
Entry
122590816         CDS       T07610                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03420  Nucleotide excision repair
ecad04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122590816
  09124 Replication and repair
   03420 Nucleotide excision repair
    122590816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122590816
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122590816
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     122590816
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122590816
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122590816
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 122590816
NCBI-ProteinID: XP_043618920
LinkDB
Position
3:complement(44395484..44403447)
AA seq 1089 aa
MSTYNYVVTAHKPTNVTHSCVGNFTGAQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATVELFRPHGETQDLLFIATERYKFCVLQWDADVNEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHVKTYEVSLKDKDFAEGPWSQNNLDNGADLLIPVPPPFCGVLIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHSGLLHLLVIAHEKEKVTGLKIELLGET
SIASTISYLDNAFVYVGSSYGDSQLVKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATDDLYDTFLVVS
FISETRILAMNLEDELEETEIDGFCSQVQTLFCHDAVHNQLVQVTSSSVRLVSSTSRELR
NEWFAPAGFSINVATANATQVLLATRGGHLVYLEIGDGILVEKKHAQLKYDISCLDINPI
GENPNYSNLAAVGMWTDISVKIFSLPDLNLVTEEQLGGEIIPRSVLLCAFEGIPYLLCAL
GDGHLLNFLLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKYNQSSTEESEMHFIRLLDDQTFDFISTYSLDQFEYGCSILNCSFSDD
NNAYYCVGTAYVMPEENEPTKGRILVFMVEDGKLQLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGHIPTIIFGTVNGVIGVIASLPQDQYIFMEKLQTNLRKI
LKGVGGLSHEQWRSFYSEKKTVDSRNFLDGDLIETFLDLGRNRMEEISKAMNVSVEELMK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtacatataattacgttgtaacagctcataaacctacaaacgtcactcattcatgc
gtcggcaatttcactggtgctcaagaacttaatctcattatagcgaaatgtacgcgtatc
gagattcatttacttactcctcaagggttgcagcctatgctggatgtgccaatatatgga
agaatcgcaactgtagaactctttcgacctcatggtgaaacacaagaccttctctttatt
gcaacagaaagatacaaattttgtgttcttcagtgggatgctgatgtaaacgaggttatt
acaagagctatgggtgatgtctcagatcgcataggcagaccgacagacaatggccagata
gggataattgaccctgattgcagactcattggactccatctctatgatgggttgtttaag
gtcattccatttgataataaaggacaactcaaagaagcatttaacatcaggctagaagaa
ctacaagttttggatatcaagtttctatatggctgtccaaagcctacaattgttgttctt
tatcaggataataaagatgcccgtcatgtaaaaacttatgaggtttctttgaaggataaa
gactttgctgaaggcccgtggtctcagaacaatcttgacaacggagctgatttactaata
cctgttccaccaccattttgtggtgtattgatcattggtgaagagacaatcgtgtattgt
agtgcctctgcgtttaaagcaataccaattagaccttctattactagagcatatggaagg
gtggatgcagatggttccaggtatttacttggggaccatagtgggcttcttcacttgctt
gtcatagctcatgagaaagaaaaggttactggactaaaaattgagcttcttggggaaaca
tctatagcatcaactatatcatatcttgacaatgcatttgtatatgttggttcaagctat
ggagattcccagcttgttaagttgaatctccaacctgatgcaaaaggttcctatgtagaa
gtgctagaaaggtacgtcaacttgggaccaattgttgacttttgtgtggttgacttagag
aggcaaggtcaagggcaagttgtgacttgctcaggagcgtataaagatggttcccttcgc
attgtaagaaacggtattgggatcaatgaacaggcatccgtggaactgcaaggtattaaa
ggaatgtggtcgcttagatctgcaacagatgatctgtatgacactttcttggttgtgagc
ttcatcagtgagactcgaatattggccatgaatctagaggatgagctagaggaaactgag
attgacggcttttgttctcaagtacagacattattttgtcatgacgctgttcataatcaa
ctagttcaggttacctcaagctctgtgagactggtaagttcaacatcaagagagctacgt
aacgaatggtttgcacccgctggtttctcaataaatgttgccactgcaaatgctactcag
gttttgttggctactagaggtggtcatctagtttaccttgaaattggtgatggtatttta
gttgaaaaaaagcatgcacaattgaagtatgatatctcatgccttgacattaaccccatt
ggtgaaaatccaaactatagtaaccttgctgcagttggtatgtggacggatattagtgtc
aagatattttcactgcctgacctaaatctggtcaccgaggaacagttaggtggtgaaatt
attccccgatctgttcttctttgtgcctttgaagggataccttacttgttgtgtgctctt
ggagatggtcatcttttaaactttttactgaacacgagcactggcgaattgacagatagg
aagaaagtgtctcttggtacccagccaataacgttacgaacattttcatcaaagaatacc
acacatgtttttgcagcctctgataggcccacggttatatacagcagtaacaagaaattg
ctctacagtaacgtgaacctaaaagaagtcagtcacatgtgccctttcaattctgcggct
tttccagacagtttggcgatcgctaaagaaggtgaattgacaattgggacaattgatgac
attcagaaacttcatatccgttctatcccgcttggtgaacatgcaaggcgaatctgccac
caagagcagtcacgaacatttgctatatgtagtttaaaatacaaccagtcaagcactgaa
gaatctgaaatgcatttcatccgcttgttggatgatcagacatttgatttcatatcgact
tactcacttgaccagtttgagtatggttgttccatacttaattgctctttctcagatgat
aataatgcatattactgtgttggcacggcttatgttatgccagaggagaatgaaccaacg
aagggccgaattttggttttcatggtcgaagatgggaagctacagctagtagctgagaaa
gaaactaaaggtgctgtttactccttgaatgccttcaatggtaaacttcttgctgctata
aatcaaaaaattcagttgtacaagtggatgcttcgagatgatggtacacgagaattacaa
tctgaatgtggacatcatgggcacatacttgctctctatgtacaaactcgtggggatttt
attgttgttggtgatttgatgaaatcaatttcattgttgatatataagcatgaggaaggt
gctatagaggaacgggcccgtgattacaacgctaactggatgtcagctgtcgagattctt
gatgacgatatttatcttggtgcagagaacaactttaaccttttcacagttcgcaaaaac
agtgaaggcgcaactgatgaggaacgaggccgtctagaggtggttggtgaataccacctg
ggcgaatttgtgaaccgtttccgacatggttcgctcgtgatgcggttacctgattctgat
gtcggtcatataccaactattatatttggaacagtcaatggtgttattggtgtcattgcc
tcacttcctcaagatcaatacattttcatggagaaacttcagacgaatttgagaaagatt
ctaaaaggggttgggggtttgagccacgagcaatggagatcattttatagtgagaagaaa
accgttgactcaagaaactttttggatggcgacttgattgagacgtttcttgatttggga
cggaacagaatggaagagatctcaaaagcaatgaacgtgtcggtggaggaacttatgaaa
agagtagaagagctaacaaggttgcattag

DBGET integrated database retrieval system