Erigeron canadensis (horseweed): 122590822
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Entry
122590822 CDS
T07610
Name
(RefSeq) farnesyl diphosphate synthase 2-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122590822
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ecad01006
]
122590822
Enzymes [BR:
ecad01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122590822
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122590822
Prenyltransferases [BR:
ecad01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122590822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122590822
NCBI-ProteinID:
XP_043618926
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All DBs
Position
3:584541..596453
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AA seq
381 aa
AA seq
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MASFNRLFIGSSRLSSVGPRTSSSLLNCYSSLPRTTLITTIDMKSKFQQVYDTLKYELLH
DPSFVFDDDSRQWVDKMIDYNVPGGKMVRAVSVVDSYWLLKEEEELTDNEVFLACALGWS
IEWLQAYLIVHDDIMDGSYTRRGQPCWFRLSEIGMSAVNDGVILRNHVFKILKRYFHNKV
YYVHLLDLFNEVEFQTVSGQMIDAIAAHVGEKDLSNYTLSFYRRMVAYKSSYYSFYLPVA
CAFLMFGESLDDHIQMKDILVEMGIYYQVQNDYLDTFGDPNVFGKTGTDTEERKCSWLVV
KALELANEEQKKILNENYGIKDSSCIANMKELYHTLNLEGAYEEYENKTNEELVKSIEAY
PNKVVQEILKSCLTKIYRKHK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttaatagacttttcattggtagtagtcgtctttcatcagttgggcctaga
acatcatcatctcttttgaattgctattcttctctccctagaacaacattaattacgacc
atcgatatgaagtccaaattccagcaagtttatgatactctgaaatatgagctacttcat
gatccgtcatttgtatttgatgacgattctcgtcaatgggttgacaagatgatcgactac
aatgtgccaggaggaaagatggttcgagccgtttctgttgtcgatagctactggttgctt
aaagaagaagaagaactcacagataatgaagtttttcttgcttgtgctcttggttggtcc
attgaatggcttcaagcatatcttattgtccatgatgacataatggatggctcctatacc
cgcagaggtcaaccctgttggttcagactatccgagattggcatgagtgctgtaaatgat
ggtgttattcttcggaaccatgtcttcaagatccttaagagatatttccataataaagtc
tattatgtgcatctgctggacctcttcaatgaggtggaatttcaaacagtctctggacaa
atgattgatgcgattgctgcacatgttggagagaaagatctctcaaactacaccttatct
ttttaccgtcgcatggttgcatacaaaagctcttattactcattttaccttccggttgca
tgtgcattccttatgtttggagaaagtttggatgatcatattcaaatgaaagatatcctt
gttgaaatgggtatctattatcaagttcagaatgattatcttgacactttcggtgaccct
aatgtgtttggcaagaccggaacagatactgaagaacgtaagtgttcgtggttggttgtg
aaagcactggaactagccaacgaggagcaaaagaaaattctcaacgaaaactacgggata
aaggattcaagttgtatagcaaatatgaaggaactataccatactctcaaccttgagggt
gcctatgaagagtacgagaacaagactaatgaggagctagtcaaatcaattgaagcttac
ccaaacaaagtagtacaggaaatactgaaatcatgcttgacaaagatatataggaagcat
aagtaa
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