Erigeron canadensis (horseweed): 122590913
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Entry
122590913 CDS
T07610
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122590913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122590913
Membrane trafficking [BR:
ecad04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122590913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
DCB
Sec7-like_HDS
Mon2_C
TPR_28
DNA_PPF
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
122590913
NCBI-ProteinID:
XP_043619023
LinkDB
All DBs
Position
3:41292059..41300834
Genome browser
AA seq
1796 aa
AA seq
DB search
MASAEADSRLMNTVLVPALDKIIKNSSWRKHSKLGNECKSVIQRITSIEKPQPLSPKSPG
KTDNNQSDVDKDVVDTDTAEKSVNIGGVLHDSGNNELNLDESEFILSPFIKACDSGDLKI
AEPALDCIQKLIAYGYLRGESDPSSGPEGKLLGKLIESVCKCCVLGDEGVELLVLKTILS
AVTSVQLRIHGDSLLEIVRTSYDIYMNSRNVVNQSTAKASLIQMLVIVFRRMEADSSTVP
LQPIVVAELMEPGEKGGEDDDGGMSMFVQGFISKVMQEIDGVLNQGTPAGANGGVHNGAF
ETKTSTTETTNPADLLDSTDKDMLDAKYWEMSMYKTALEGRKGELAEGEVERDDDLDVQI
GNKLRRDAFLVFRALCKLSMKTPPKEALADPQLMRGKIVALELLKILLENAGAIFRTSER
FLGAIRQYLCLSLLKNSASSLMIVFQLSCSIFFSLVSRFRAGLKAEIGVFFPMIVLRVLE
NVAQPNFQQKMIVLRFFERLCVDSQILVDIFINYDCDVNSSNIFERTVNGLLKTAQGVPP
GAMTTLLPPQDAALKHEAMKCLVAILKSMGDWMNKQLHIPDPHSEKKFEIVENNSELADS
SMENGNANENEPVDGLDSHPEASSEASDASTIEQRRAYKLELQEGISLFNRKPKKGIEFL
IKVNKVGNSPGEIADFLKNASGLNKTLIGDYLGEREDLSLKVMHAYVDSFDFEGMDFDEA
IRSLLRGFRLPGEAQKIDRIMEKFAERYCKCNPKAFISADTAYVLAYSVILLNTDAHNPM
VKNKMSPDDFIRNNRGIDDGKDLPPEYLKSLYERISKNEIKMKEDDLAIKQRQSVNSNRM
LGLDSILNIVVRKRGDESNASDDLMQHMQEQFKEKAQKSESVYYAATDVFILRFMLEVCW
APMLAAFTVPFDQSDDDIVIAQCLEGFRYAIHVTAAMSMKTHRDAFVTSLAKFTSLHSPA
DIKQKNVEAIKAMVTIAYEDGNHLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAVNQN
ESNKSQSKSNILPVLKNKGAGRIQQVAAAMRRGSYDSAGIGGNASAAITPEQVNNLVSNL
SILEQVGEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSTSDPRVFSLTKIVEIAHYN
MNRIRLVWTSIWNVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNDF
MKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTAAASDDHKSIVLL
AFEIIEKIVRDYFPYITETETTTFTDCVNCLIAFTNNRSDKDISLSAISFLRFCAAKLAE
GDLGASSTYKDKEASGKMSPSSPQQGKDGKFDRGELTDKEDHLYFWFPLLAGLSELSFDP
RPEIRNSALQVLFDTLRNYGHHFSLALWGRVFDSVLFPIFDYVRHASDSSGESSIPHGTN
GDVDELDQDSWLYETCTLALQLVMDLFVNFYDTVNPLLEKVLLLLVSLIKRPHQSLAGIG
VAAFVRLMSSAGEFFTDDKWLEVVLALKGAANATLPNFSFILSEDNMNLNTEDVSMRQSN
GDSDNLENLQKSRLYAVISDAKCHAAVQLLLIQAIQEIYDIYRPHLSAKNTMILFDAVHG
VANHARKINVDTTLRAKLQDLQPMTQMQDPPLLRLENESYHICLTFIKNLAVDKPPFYEE
SKVESSLVSLCEEVLKFYIDLALPAHTSELSRGVQPHWLIPSGSGKKRELAARAPLIVVT
LQAICSLGDSSFEKHLPSYFPLLSSLIRCEHGSNDVQVALSEMLSSSVGPVLLRSC
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcggaagccgattcccgccttatgaacacggtgttagttccagccctagat
aaaataatcaaaaacagctcgtggcgcaaacactccaaattaggtaatgaatgtaaatct
gttattcaacgtattacttcaattgaaaaacctcaaccgttatctcctaaatcaccggga
aaaactgataataatcaatcagatgtagataaagatgtagtagatacagatacagctgaa
aaatctgtaaatataggtggtgtattgcatgattcaggtaataatgaacttaatttagat
gaatctgaatttattttaagtccttttatcaaagcgtgtgattccggtgatcttaagatc
gccgaaccggcattagactgtatacagaaactgattgcgtatggttatttgagaggcgaa
tcggatccgagtagcggaccggaagggaagctgttagggaagttgattgagagtgtttgt
aagtgttgtgtgttaggagatgaaggagtggagttgttagttttgaagacgattttatct
gcggtgacgagtgtgcagttgaggatacatggagatagtttgttggagattgttaggact
agttatgatatttatatgaatagcaggaacgtggtgaatcagagtaccgcgaaggcgtcc
ttgattcagatgcttgtgattgtgtttaggaggatggaggcggattcgtcaacggttccg
ctgcagccgattgtggtggcagagttgatggagcctggggagaaaggtggagaggatgat
gatgggggaatgtcgatgtttgttcaagggtttattagtaaggttatgcaggaaattgat
ggagttttgaatcagggaacaccggcaggagccaatggtggtgtgcataatggggcgttt
gagacgaagacgtcgactacggagacgacaaatcctgctgatttgttggattctactgat
aaggatatgttggatgccaagtattgggagatgagtatgtataaaactgcattggaggga
cggaaaggggaattggcggagggtgaggtggagagagatgatgatttggatgtgcagatt
gggaataagctgagaagggatgcgtttttggtttttcgggctttatgcaagctttcaatg
aagactcccccaaaagaggcacttgcagacccacagttgatgcgaggaaaaattgttgca
ttggagttgctcaaaattttgttggagaatgccggggcgatttttagaaccagtgaaaga
ttcctgggtgccattaggcaatacctatgcctgtctttgttaaagaacagtgcatcatcg
cttatgattgtattccagctctcctgttcgattttctttagcttggtctcaagatttaga
gctggattgaaagctgaaattggagtgttctttccaatgattgttctcagggttctagaa
aatgttgcccaaccaaatttccagcagaagatgattgtactgcggttttttgaaaggttg
tgcgttgattcacagatcttggttgatatatttatcaattacgattgcgatgtcaattca
tctaacatatttgaaaggacggtaaatgggcttctcaaaacggctcaaggtgtcccacct
ggcgccatgactactctcttgccacctcaggatgcagccttgaaacatgaggcaatgaag
tgtttagtggctatcttaaaatcaatgggggattggatgaacaaacaattacacattcct
gatcctcactcagaaaagaaatttgaaattgttgagaataattctgaattggccgattct
tccatggaaaatggaaatgcaaatgagaacgagcctgttgatggattggattctcatccg
gaagcttctagtgaagcttcggatgcttcaacaatcgagcaacgccgggcctacaagctg
gaacttcaggaaggtatatctcttttcaataggaaacctaaaaagggtatcgaatttttg
attaaagtgaataaagtggggaattcgcctggagaaatagcagattttttaaagaatgct
tctggtttgaacaagacgttgattggtgattaccttggagaaagagaagatctatcactg
aaagtaatgcatgcatacgttgactcgtttgactttgaaggtatggattttgatgaggca
attagatcccttctacggggatttagattgcctggtgaggctcagaagattgaccgaatt
atggaaaaatttgctgagcgttactgcaaatgcaatccaaaagcattcattagtgctgat
acagcctatgttcttgcctactctgttatactactcaataccgatgcacacaatcctatg
gttaaaaataagatgtcacctgatgattttataagaaataatcgtggcatagatgatgga
aaagatttgcctcctgaatacctgaaatctctgtatgaaaggatatcaaaaaatgaaatt
aaaatgaaagaagatgatctagcaattaaacagaggcagtctgtaaactcaaacaggatg
ttgggtttagatagtatactgaatattgtggtgcgcaagagaggcgatgagagtaatgcg
agtgatgatcttatgcaacacatgcaagaacagtttaaagagaaagcacaaaaatctgag
tcagtttattatgctgcgacagatgtctttatattaagattcatgttagaggtatgctgg
gcacctatgctggctgcctttactgttccgtttgatcaaagtgacgatgatatagtaatt
gctcaatgtctggaaggctttcggtatgcaatacatgttacggcagcaatgtccatgaaa
actcatcgagatgcttttgttacatcactggccaagtttacaagtcttcattcaccagca
gatattaaacaaaaaaatgtagaggcaatcaaggcaatggttacaattgcatatgaagat
gggaatcacttacaggaggcctgggagcatatattgacgtgtgtatctcgatttgagcac
ttgcacttgttgggagagggagctcctccagatgctacgttttttgctgttaatcagaat
gagtctaacaaatcacagtcgaagtcaaatatccttccagttcttaagaataagggagct
ggtaggattcagcaggtagctgcggctatgagaagaggttcatatgatagcgctggcatt
ggcggcaatgcttctgccgctattacaccagaacaggttaataacttggtctccaactta
agcattttggaacaagttggagaaatgaatcgtatattcacaaggagtcagaaactaaac
agtgaggcaattatcgattttgtgaaagcactttgcaaggtgtccatggaggagcttcgt
tctacatctgatccaagagtattcagcctcacaaaaatagttgaaattgcccactacaac
atgaatcgcatcagacttgtgtggacaagcatttggaatgtactctctgatttttttgtg
accataggatgttctgagaacttatcaattgcgatatttgcaatggactctttacgccaa
ttatctatgaaatttttggagcgagaagagttggctaattacaattttcagaatgacttt
atgaagccttttgtcatcgtcatgcgcaagagtagtgctgtggaaattcgcgaattgatt
atccgatgtgtgtctcaaatggttttatcacgcgtcaataatgttaaatccggatggaaa
agcatgttcatggtcttcacagcagcagcttctgatgaccacaaaagcatcgtacttctt
gcattcgaaataattgagaagatagtacgggattactttccatacattaccgagacagaa
accacaacttttacagattgtgtaaattgtctaatcgcgttcaccaataacagatctgac
aaagatattagtctcagtgctatcagtttcttgcgtttctgtgctgccaaactcgctgaa
ggagatctaggcgcctcttcaacatacaaggacaaggaagcttctggtaaaatgtcccct
tcatcacctcagcaaggaaaggatgggaaatttgaccgtggagagttaacagataaggaa
gatcatctatacttctggtttccattattagccggattgtctgaacttagctttgaccct
aggcctgagattaggaatagtgctcttcaagtactctttgatacgctaaggaactatggt
catcacttctctttagcattatggggaagggtgtttgactctgtcctctttcctatcttt
gactatgttcggcatgcttctgattcttccggtgagagctcaataccacatgggactaat
ggtgatgttgacgagcttgatcaagactcttggctgtatgagacatgcactcttgctctc
cagttggttatggatctttttgttaacttttatgacactgttaatcctcttctggaaaag
gttctattgttattagtaagccttatcaagcgtcctcaccaaagtctcgccggtattggt
gttgctgcttttgttcgtttgatgagcagtgctggggaattctttactgatgataaatgg
cttgaagtggttttggcgcttaagggtgcggctaatgcaacacttccgaatttctcattc
attctcagtgaagataatatgaacttgaatactgaagatgtttcaatgagacaaagtaat
ggggactctgacaatttggagaatctacagaagagtcgtttatatgctgttatttctgat
gcgaagtgccatgcagcagttcaacttttattaatccaggcaatacaagagatctatgac
atttatagacctcatctatcagcaaagaacaccatgatactatttgatgcagtgcatgga
gtggcaaatcatgctcgcaaaataaacgtagatactacattacgcgctaagttacaagac
cttcaaccgatgacacaaatgcaagaccctccattattacgcctagaaaacgaatcctac
catatctgcttaacatttataaagaatcttgcagtggataagcctccattttacgaggaa
tcaaaggtggagtcatcccttgtttccctttgcgaggaagttctaaaattctacattgac
ttagcgcttcctgcacatacgagtgagttgtctcgtggggtccaaccccactggttgata
ccctcgggctctggtaaaaagagagaattggctgctcgtgctcctcttatagttgtaaca
ttacaggctatttgtagtttgggtgattcttcatttgagaagcatcttccaagttatttc
cctctgctttcaagcttgataaggtgtgaacacgggtccaatgatgttcaggtggctctt
agtgaaatgcttagttcttctgttggacctgttctactacgctcgtgttga
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