Erigeron canadensis (horseweed): 122590922
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Entry
122590922 CDS
T07610
Name
(RefSeq) coatomer subunit gamma isoform X1
KO
K17267
coatomer subunit gamma
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122590922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122590922
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122590922
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122590922
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
Cnd1
HEAT_2
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
122590922
NCBI-ProteinID:
XP_043619038
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Position
3:29908876..29917962
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AA seq
883 aa
AA seq
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MSQYVKKDDDRDEDAEYSPFLGIEKGAVLQEARVFNVPQLDSRRCSQVITKLLYLLNQGE
TFTKVEATEVFFSVTKLFQSKDIGLRRMVYLIIKELSPSSDEVIIVTSSLMKDMNSKTDV
YRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVRRWSN
EVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQV
IRESSANSGERPFYDFLEGCLRHKAEMVILEAARAITELNDVSGRELTPAITVLQLFLSS
SKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESGVD
RLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRTLMNFLSNILREEGGFEYKKAIV
DSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYN
RVILENATVRASAVSTLAKFGAMVDSLKPRIFVLLRRCLYDNDDEVRDRATLYLNTLGGD
GSVVETDKAVKDFLFGSLDIPLVNLETSLKNYEPTEEPFNINNVPREVKSQPLAEKKTAG
KKPTALSAPPAAPTSTVDAYERLLSSIPEFSTFGQLFKSSVPVELTEAETEYAVNVVKHI
FDKHVVFQYNCTNTIPEQLLENVVVVVDASEAEEFAEVATKPLNALPYDTPGQTFVAFEK
PEGVPAIGRFSNVLKFLVKEVDPSTGEAEEDGVEDEYQLEDSEIVAADYMLKVGVSNFKN
AWESLGPEFERVDEYGLGPRESLNEAVNAVINLLGMQPCEGTEVVAANSRSHTCLLSGVY
IGNTKVLVRLSFGVDSSKEVAMKLAVRSEDESVSDAIHEIVAN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatacgttaaaaaagacgatgatcgcgacgaagacgcagagtactcgcccttt
ctcggaatcgagaaaggagctgtacttcaagaagctcgggtgtttaacgttcctcagttg
gattcaaggaggtgttcccaggttattacaaagctgctttatcttctaaatcaaggagaa
acttttaccaaggtcgaagccacagaagttttcttttccgtgacaaaactatttcagtct
aaagatattggtttaaggagaatggtttatttgattataaaggagctttctccctcatcg
gacgaggttattattgtcacaagctctctcatgaaagacatgaatagcaagacagacgtc
tatagagcaaatgcaatacgtgttctctgccgcataacagatggaacactccttactcaa
atagagaggtacttgaaacaagctattgtcgacaaaaatcctgtagttgccagtgcagct
cttgttagtggtatccacttgctccagacaaatccggagatcgtgagaagatggagcaat
gaagtacaagaagctgttcagtcaagagctgcactcgtgcagtttcatgcacttgcgctg
ctccaccagatacgtcaaaatgatagattggctgtcagcaaattagttaccagcttgaca
aggggcacagttcgttcacctttggctcaatgcctgttgattcgttacaccagtcaggtt
attagagagtccagcgcgaacagtggggagcgcccattttatgactttttggagggttgc
cttcgccacaaagcagaaatggttatattggaagcagctagagccataacagagttgaat
gatgtttctggccgagaactgactcctgcgattaccgttctacaactctttctaagttca
tctaagccagtacttcggtttgctgctgtccgcacattaaacaaggtggcaatgacccat
ccaatggctgtaactaactgtaatattgatatggagagcttgatttcagatcaaaataga
agcattgctacccttgccattactacactgctgaaaacaggcaatgaatcaggggttgat
cgtttaatgaagcaaattaccaacttcatgtctgacatagcagatgagttcaaaattgtt
gtggtagatgctatcagatccttatgtttgaagttcccactcaagtacagaacattgatg
aacttcttaagcaatattctaagggaagaaggtggatttgagtacaaaaaagcaattgtt
gattcaattgtgattctcatacgcgatattccggacgcaaaagagagcgggcttcttcac
ttgtgtgaatttattgaggattgtgaatttacatatctttcaacacagattctccatttt
cttggtgttgagggtccaaagacctctgatccgagcaaatacataaggtatatatataac
cgggtcatccttgagaatgcaactgttcgagccagtgcagtaagcacattggcaaagttt
ggtgccatggttgattctttaaagccccgtatattcgttcttttgaggcggtgcctgtat
gataatgacgatgaggttcgtgatagggctactctgtatttaaacactcttggaggagat
ggttcagttgttgaaactgataaagctgtgaaagactttctatttggatccctggatatc
ccattggtcaatctagagactagcctgaagaactatgaacctacagaagaaccatttaat
attaataatgtacctagagaagtcaagtctcagccacttgcagagaaaaaaactgctggt
aaaaagcccactgctctcagcgcacctccagccgcacccacttccacagttgatgcatat
gagaggctcctatcatctattccagagttttctacgtttggacagcttttcaagtcctct
gtaccagtagagctcactgaagctgaaacagaatatgcagttaatgttgtgaagcacata
tttgacaagcacgttgtcttccagtacaactgtacaaatacgattcctgagcagttacta
gagaatgtggtggttgttgtggatgcttcagaggcagaagagtttgctgaggtggcaacg
aagccattgaatgccctaccatatgacacacccggtcaaacatttgtggcatttgagaaa
ccggaaggggtcccagctattggcagattctctaatgttttgaagttccttgttaaagag
gttgatccttctactggtgaggccgaggaagatggtgtggaagatgagtatcaactggag
gactctgagatagtcgcagctgattatatgcttaaggttggtgtgtccaatttcaaaaat
gcatgggaaagcttgggcccggaatttgagcgagttgatgagtatgggcttggtccaaga
gaaagtttaaatgaagctgttaatgctgttatcaatcttcttggcatgcaaccttgtgag
ggcactgaggtggttgcagccaactcaagatcacacacatgcttattgtcaggagtatac
ataggcaacacaaaggtgctggtccgcctatcatttggagttgatagttccaaagaagtg
gcaatgaaactcgctgttagatctgaagatgagtctgtgagcgatgcaattcatgagata
gtagccaactag
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