Erigeron canadensis (horseweed): 122591018
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Entry
122591018 CDS
T07610
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122591018
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122591018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122591018
NCBI-ProteinID:
XP_043619139
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All DBs
Position
3:40250477..40254728
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AA seq
370 aa
AA seq
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MATANPFDLLGDDDNDDVSQLVQKIASAPVKKAPAPAAAIAGKTAAKPAAKLPTKPLPPA
QAVKEARNEGGRGGRGRGYGRGRGGGGYNRDSGSNETSFGNRGFSGDQGAVEESDTGKGY
ERRVGYGGPRGGGGFRGGRRGGFTNGDVEDGDRPPRRPYERRSGTGRGNEFKREGAGRGN
WGTQEDEIIQETQEVVNEGEKTVASEKLVSEEEATDEKKENAANEPEEKEPEVKEMTLEE
YQKVLEEKRKALEALKTDERKVEVDKELASMQQLSNKKSNNEIFAKLGTDKEKRKEIAEK
EDKTKKSLSINEFLKPAAGERSFSSGGRGRGRGPRGGGGGGRYNQGGSSSYAAEAPKIED
PSHFPTLGGK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcgaacccttttgatttgcttggcgatgacgataacgatgacgtttcacag
cttgtgcaaaagattgcttctgcacctgtcaagaaagctccggctccggcggcggctatt
gccggtaaaacggcggctaagccggcggctaaacttcccaccaagccccttcccccagct
caggctgtgaaagaggctaggaatgaaggtgggcgtggagggcgtggacgtggttatgga
cggggacgtggtggaggcgggtataatagagactcaggtagcaacgagacttcgtttggt
aacagagggttttctggtgatcaaggtgccgttgaggagtctgatactggaaaagggtat
gagagacgagttggttatggtggtcctcgtggtggtggtggtttccgtggtggtcgtcgt
ggtggatttactaatggagatgttgaggatggagatcgtccacctcgtcgaccatatgaa
cgacgtagtgggacaggcagagggaatgagttcaagcgcgagggagctggtcgtgggaac
tggggaactcaagaagatgaaattattcaggagacccaggaagtggtgaatgaaggggag
aaaactgtggcttctgaaaagctggtgtctgaggaagaggcaacagatgagaaaaaggag
aatgctgcaaatgaacccgaggagaaagagccagaggttaaggagatgactcttgaagaa
tatcaaaaggttcttgaggagaagaggaaagctttagaggcactcaagactgatgagagg
aaggtggaagttgacaaagagctcgcgtccatgcaacagctctccaacaagaagagcaac
aatgagatctttgctaaactgggcactgacaaggaaaagcgtaaagagattgctgagaaa
gaagataaaactaagaagtctctcagcatcaatgagtttttgaaacctgctgcgggtgaa
agatccttctcttcaggtggccgtgggcgtggacgtggtcctagaggcggaggtggcggt
ggacgttataaccaaggtggttcatctagctatgctgctgaggccccaaaaattgaagat
ccaagtcactttcctactttaggtggcaagtga
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