KEGG   Erigeron canadensis (horseweed): 122591070
Entry
122591070         CDS       T07610                                 
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
ecad  Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122591070
   03032 DNA replication proteins [BR:ecad03032]
    122591070
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122591070
Spliceosome [BR:ecad03041]
 Complex C
  Other components
   Complex C specific factors
    122591070
DNA replication proteins [BR:ecad03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122591070
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122591070
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin
Other DBs
NCBI-GeneID: 122591070
NCBI-ProteinID: XP_043619202
LinkDB
Position
3:42792393..42795127
AA seq 463 aa
MDQLQSQSQSQIYQIITKLINGKSQTLNFKTPIIPISQIKSQIQTLTSIPIHHQLLISNG
KTLQDDVVLHHETNSPTLHLLLRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRR
LRHVNAEKKMEEWLAEETERKLEKVAEDFIKKQSKLAKKAGGGNGDGAEKYVEKYRNDSR
KCMEDVEKSVRESLSSGFLKSKRKVEEGNGSVSKSKKLKIWMGKRKVDDSDSDDMGEEDS
DDEEMADELDQSGVTNNENRSDSHKDADGSLASVNGGKVEGESSVGCSSESASEEEKENV
AEERLGSVEESKDEVSLHEEADAPVVHEESIMNNLNDSVSLEMEKFTKPEFNDSEQKQCK
LTSISDGQEAGTNDVEVENSDSKIVDEEKLSTRSDCPEPEKPLNFDEFNSAAEIEVLGME
RLKSELQERGLKCGGTLQERAARLFLLKTTPLEMLPKKLLAKK
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggatcaattacaatcacaatcacaatcacaaatctatcaaataatcactaaactaata
aacggaaaatcacaaaccctaaatttcaaaaccccaattatcccaatttcccaaatcaaa
tcccaaatccaaaccctaacctcaatcccaattcaccaccagctcttaatctcaaacggc
aagactctccaagacgacgtcgttctacaccatgaaacaaattcaccaactttacatctt
ctgctgcgtctgcgcggcggaaaaggcgggttcgggtcgttgctccgtggggcggcgacg
aaagccgggcaaaagaagacgaataacttcgacgcgtgtcgtgatatgagtggacggagg
ttgaggcacgtgaatgctgaaaagaagatggaagaatggttggctgaagagacagaaagg
aagcttgagaaagttgcagaggatttcattaagaagcagagtaaactcgcgaaaaaggcg
ggtggcgggaacggcgatggggcagagaagtatgttgaaaagtataggaacgattcgagg
aaatgtatggaggacgttgagaagtcggtcagggaatcattgtcgagcgggtttttgaag
tcgaaaaggaaggtggaggagggtaatgggagtgtgtctaaatcgaagaaacttaaaatt
tggatgggaaagagaaaagttgatgacagtgacagtgatgacatgggtgaggaagatagt
gatgatgaagagatggctgatgaacttgatcaatctggtgtaacaaacaatgaaaaccga
tctgattcccataaggatgcggatggaagtctagcatctgtcaatggcgggaaagttgaa
ggagaatcttcagttggttgttcatctgagagtgcatcggaagaagagaaggagaatgtt
gcagaagaacgtttgggatctgttgaagagtcaaaagatgaagtttctcttcatgaagaa
gctgatgcaccagtggtacatgaagagagcataatgaacaacttaaatgattctgtttct
ctcgaaatggagaaattcaccaagcccgagttcaatgactcggagcaaaaacagtgtaaa
cttacaagcatatcagatgggcaagaggctggaactaatgatgtagaagttgaaaattct
gattctaaaatagttgacgaagagaaactgtctacaaggagtgattgtcctgaaccggaa
aagccattaaattttgatgagttcaactcagcagctgagatagaggttcttggaatggaa
aggctaaaatctgagcttcaggaaaggggattaaagtgtgggggaactttgcaagaacgt
gcagccagactttttcttctgaaaaccaccccactagagatgctaccaaaaaagctgctt
gctaagaagtga

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