Erigeron canadensis (horseweed): 122591080
Help
Entry
122591080 CDS
T07610
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00020
Citrate cycle (TCA cycle)
ecad00640
Propanoate metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01200
Carbon metabolism
Module
ecad_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ecad_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
122591080
00640 Propanoate metabolism
122591080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122591080
Enzymes [BR:
ecad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
122591080
6.2.1.5 succinate---CoA ligase (ADP-forming)
122591080
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122591080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Succ_CoA_lig
GARS_A
Motif
Other DBs
NCBI-GeneID:
122591080
NCBI-ProteinID:
XP_043619211
LinkDB
All DBs
Position
3:38109797..38114713
Genome browser
AA seq
423 aa
AA seq
DB search
MVRGLITKLANKSISVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVSSIEELRK
AIQTTFPNEKELVVKSQILAGGRGLGKFTSGLQGGVHIVNIDQVEDIAGKMLGQTLVTKQ
TGPQGKVVSKVYLCEKVTLKNEMYFAITLDRTTAGPLIIACGQGGTSIEDLAEKYPDMII
KVPIDVFKGITDEDAAKVVDGLAIKTADRTASIEQVKKLYNLFCESDCTQLEINPIAETE
DKKLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNG
AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDDKVKAILVNIFGGIMKC
DVIASGIVNAAKHVSLKVPVVVRLEGTNVDEGKRILKESGMTLITAEDLDDAAEKAVKAL
KSG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggggctgataaccaagctcgcaaataaatctatctccgtcgccggaaaatgg
caacagcagcagctccgccgtctcaacatccatgagtatcagggagctgagttgatgagt
aaatatggtattaacgtaccaaaaggtgttgctgtttcttctattgaggaacttagaaag
gccattcaaacaacatttcccaatgaaaaggagttggtggtcaagagccaaattcttgct
ggtggacggggcctagggaagttcacaagtggtcttcagggtggagttcacattgtcaac
attgatcaggttgaagatatagctgggaagatgcttgggcagactcttgtcactaaacaa
acgggcccccaaggcaaagttgtcagcaaggtttacttgtgtgaaaaggtgacactaaag
aatgagatgtacttcgcgatcactcttgatcgtaccactgctggtcctcttatcattgcc
tgcggtcagggaggaaccagcatcgaagatcttgcagaaaaataccctgacatgatcata
aaagtacccattgatgtttttaaaggaattacagatgaagatgctgccaaagttgtagat
ggtcttgctatcaagacagctgacagaactgcttcaatagaacaggtgaagaagttgtat
aaccttttctgcgaatctgattgcacccagttggagatcaaccctattgccgagactgaa
gataagaagctggtggccgctgatgctaagttaaactttgatgataatgctgcttttcgt
caaaaagagatatttgctcttcgtgacccgacacaagaagatccccgagaggtcgcggct
gcaaaagcagatttgaattatattggtttggatggggaaattggatgtatggttaatggt
gctgggttagcaatggccaccatggacatcataaagttacatggaggaacacccgccaat
tttctggatgtaggtggaaatgcttccgaaggacaggttgttgaagctttcaagatcttg
acatcagatgacaaagtgaaagcaatattggtgaatatttttggaggaattatgaagtgc
gatgtgatagccagtgggattgttaacgctgctaagcatgtttcactgaaggtgccagtc
gtagttcgtcttgaaggcacaaacgttgatgaagggaaaaggattcttaaggaaagtgga
atgacattgattacagcagaggatctggatgatgcagccgagaaagctgttaaagcactg
aaatcaggataa
DBGET
integrated database retrieval system
