Erigeron canadensis (horseweed): 122591105
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Entry
122591105 CDS
T07610
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122591105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122591105
03032 DNA replication proteins [BR:
ecad03032
]
122591105
Spliceosome [BR:
ecad03041
]
Complex A
U1 snRNP components
Sm proteins
122591105
U2 snRNP components
122591105
Complex B
U1 snRNP components
122591105
U4/U6.U5 tri-snRNP components
122591105
Complex C
U2 snRNP components
122591105
DNA replication proteins [BR:
ecad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122591105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
122591105
NCBI-ProteinID:
XP_043619245
LinkDB
All DBs
Position
3:39420020..39424083
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AA seq
108 aa
AA seq
DB search
MSRPMEEDAPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV
LENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaccaatggaagaggatgctcctgttaagaatgaggaagaggagttcaacact
gggcctctctctgtcttgatgatgagtgttaagaataacacacaggttcttattaactgc
aggaacaataagaagcttttaggtcgtgttagggcattcgatcgacactgcaacatggtc
cttgagaacgttagagagatgtggaccgaggtgccgaaaacaggaaaagggaagaagaaa
gctcttccggtgaacaaggataggtttattagcaagatgtttctccgaggcgattcggtc
atcattgtgcttagaaaccccaagtga
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