Erigeron canadensis (horseweed): 122591143
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Entry
122591143 CDS
T07610
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122591143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122591143
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122591143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
122591143
NCBI-ProteinID:
XP_043619292
LinkDB
All DBs
Position
3:complement(36926239..36936428)
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AA seq
1072 aa
AA seq
DB search
MATPGGPRPGNPPPNYNNPNPNYNPNSISDNMQNLNINRPNQPPSIGRGPVPPFGQQTFP
TSAPFSSPFSGPSRPGPPPPGVVPRGAVPPPTGPPQGALPPFMAPNRGPGGVSGPPGGNP
PPPFAARPVTSGPRPGPFGGPAMPPANVGGGGGPMNNGPPSFGPGGMQGGPQYAPAGVRP
RPATGPPPSPPSMSSPGGSYSGQSTPFSGGSPDNQPIGPPPLAPPFSAPPRGPPTFSAPG
QGMAQQQASPFGAQPWQMQPRQNVPPAPIPGSGQPSRMYGMQPALSNQQSMATISPAMGA
GGSAVTGPSKIDPNQIPRPIPSPSVLLHETRQGSQANPPPPATSEFIVRDTGNCSPRYMR
CTINQIACTSDLLTTSGMQLALLVQPLALPHPSEDPIQIVDFGESGPVRCSRCKGYINPF
MKFVDQGKRFICNFCGFTDETPRDYQCNLGPDGRRRDADERPELCRGTVEFIATREFMVR
DPMPAVFFFLIDVSMNAIQTGATAGACSAISRVITDLPEGPRTMVGIATFDSTIHFYNLK
RALQQPLMLIVPDVHDVYTPLQTDVIVQLSECRQHLDLLLESIPTMFQNNKTADSAFGAG
IKAAFLAMKSTGGKLLVFQSVLPSVGIAALSAREAEGRTNISAGEKEPHKLLQPADKNMK
QMAIDLAEYQVSVDVFITTQSYVDIASISIIPRTTGGQVYYYHPFSALSDPAKLYNDLRW
NVTRPQGFEAVMRVRCSQGLQVQEYSGNFCKRIPTDVDLPAIDCDKSIMVTLKHDDKLQD
GSECSFQCALLYTTMYGQRRIRVSTLSLPCTTMLSNLFRSADLDTQFSCFLKQSANEILT
NPLLQVREQVTNLCINILHAYRKFCATVSSSGQLILPEALKLLPLYTLALIKSIGMRTDA
RIDDRSFWINYVFPLSAQLAIPLVYPRMISIHDLNLKESEGSVIPAVIPLSSEQVNENGI
YLLENGEDCLIYIGSAADPDTTRQLFGFSSAEEVPTQFVLQQFDNPMSKKLNEVINEIRS
QRCNYLRLKLCKKGDPSGMLFFSYMVEDKSPSGLSYVEFLVHVHRQIQSKMT
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccaggtggacctagaccaggcaatccaccccctaattataataatcctaat
cctaattataaccctaattcgatttcggataatatgcaaaatttgaatataaatcggcct
aatcagccgccaagtatcggtagaggtcctgttcctccgtttggtcaacaaacatttcca
acctcagctccattttcatctccattttccgggcctagtcgtcctggacctccacctcca
ggtgtggttcctagaggtgcagtgccacctcctactggacctccacaaggtgcattgccc
cctttcatggctcctaaccgaggtcctggtggtgtcagtggtccacctggcgggaaccct
cctcctccatttgctgcaaggcctgtgacttctggtcctcgtcctggtccttttggaggt
ccggcaatgccaccagccaatgtaggtggtggtggtggtccgatgaataatggccctccg
tcgtttggaccaggtggtatgcaaggcggtcctcagtatgctccagctggtgttagacca
agaccagctactggacctccaccttctccaccatcaatgtcgtcaccaggtggttcttat
tcaggccaatcaacacctttttctggaggttcgcctgataatcaaccaatagggccacct
ccacttgctcctcccttttcagcacccccgagaggaccaccaacattttcagctccgggt
caaggcatggctcaacaacaagcttctccctttggggctcaaccatggcaaatgcaacct
cgacaaaatgtaccgcctgcaccaatccctggttctggtcaaccatcaagaatgtatggc
atgcaacctgcactttctaatcaacaatcaatggctacaatatcaccggccatgggtgct
ggtggatcagcagtcacaggaccatcaaagatcgatcctaaccaaattccgcgccctatt
cccagtccctctgtgcttctacatgaaactcgccaggggtcccaggccaatcctccaccg
cctgctaccagtgaattcatcgttagggatactggaaactgcagcccacggtacatgaga
tgtactatcaatcagattgcttgcacttccgatcttttgaccacttctggtatgcagctg
gccttgttggttcagccgttggccctccctcatccatccgaggaccccattcaaatagtg
gattttggtgaaagtggccctgttcgctgttctcggtgcaaagggtacatcaatccattc
atgaagtttgttgaccaaggaaaacgtttcatctgtaacttttgtggtttcactgatgaa
actccccgtgattatcagtgcaatttaggtccagatggcagacgacgagatgctgatgag
aggcctgagctatgtagaggcactgttgaatttattgctacaagagaattcatggtgcgt
gatccgatgccggctgtgtttttcttcctcattgatgtatcaatgaatgccatacaaact
ggtgctaccgctggagcttgcagtgccatcagtcgtgttattacggatcttccagagggc
cctcgtacgatggtgggaatagcaacatttgactcaaccatccatttttacaatctgaaa
cgtgcattgcagcagccattgatgctcatagttcctgatgtacatgatgtttacactcct
ctgcaaaccgatgttattgttcagctttccgagtgtcgtcagcatctagatctactgctg
gaaagcatcccaactatgtttcagaataataaaacagctgattcagcatttggtgctggg
attaaggctgcttttttggcaatgaagagcaccggaggaaaacttttggtatttcagtca
gtcttaccttctgttggtattgcggctctttctgctcgagaagccgaaggaagaactaat
atatctgcaggagaaaaggaacctcataaattactccaaccagcagacaagaatatgaag
caaatggctattgatcttgcagagtaccaggtctcagttgatgtatttattactactcaa
agttatgtagatattgcttccatctctatcatcccaaggacgactggagggcaggtgtat
tattatcaccccttttccgctctttccgatcctgcaaaactctacaatgatcttcgatgg
aatgttacaaggccacaaggattcgaagctgtgatgcgtgttagatgcagccagggtctt
caagttcaagaatactctggaaatttctgtaagcgcattccaacagatgtggacctgcct
gcgattgattgtgacaaatccatcatggtgactcttaaacacgatgataagttgcaagat
ggctcggaatgttcttttcagtgtgcacttctttatactactatgtatgggcaaagaaga
attcgtgtctctaccttgtccttgccctgcacaaccatgctaagcaatctcttccgctca
gctgacttggatacacaattttcatgttttctaaagcaatcggctaatgaaatccttaca
aacccgttattacaagtaagggagcaggtgacaaacctttgcatcaatattcttcatgct
tatcgcaaattttgtgcaaccgtgtcatcatcaggacaacttattcttccagaggcactt
aaactgttgcctttgtacactcttgctttgataaaaagtattggaatgcggaccgatgca
cggatagatgatcggtcattttggatcaattatgttttccctctctctgcacaattggca
attccgcttgtttaccccaggatgataagcattcatgaccttaatttaaaggaatcagag
ggatctgttattcctgctgttattcctctttcaagtgaacaagtaaacgaaaatggaatc
tatctcctcgaaaatggtgaggattgcttaatttatatcggaagcgctgctgatcctgat
acaacacgccaactctttggcttttcatctgcggaagaggttcctactcagtttgtattg
cagcaattcgacaatcctatgtcgaagaaactcaacgaggtcataaacgagatcagaagc
caaagatgcaactaccttcgcttaaaactatgcaagaaaggagatccatcaggaatgctg
ttcttttcatacatggtggaagacaagtctccaagtggtctctcctatgttgagttccta
gtacatgtccatcggcagattcaaagcaaaatgacttga
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