Erigeron canadensis (horseweed): 122591172 Help Entry 122591172         CDS       T07610                                  Name (RefSeq) coatomer subunit alpha-1-like   KO K05236   coatomer subunit alpha Organism ecad  Erigeron canadensis (horseweed) Brite KEGG Orthology (KO) [BR:ecad00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecad04131]     122591172   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ecad04147]     122591172 Membrane trafficking [BR:ecad04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     122591172 Exosome [BR:ecad04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    122591172   Exosomal proteins of bladder cancer cells    122591172 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_Aladin NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st BPS1 DUF6956 Aa-Ago_N Motif Other DBs NCBI-GeneID:  122591172 NCBI-ProteinID:  XP_043619328 LinkDB All DBs Position 3:complement(30417348..30424506) Genome browser AA seq 1214 aa AA seqDB search MLTKFETKSNRVKGLSLHSKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFH VMQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTVRIW NWQSRTCLSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRNKNPSPADDLMN NLSQINSDLFGGIDVVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRLLKLWRMNDTKAW EVDTLRGHVNNVSCVMFHTKQDIIVSNSEDKSIRVWDVTKRTGIHTFRREHDRFWILACH PEMNLFAAGHDSGMVVFKLERERPAFSVSGDSMFYAKDRFLKYYEFSTQKETQVMPIRRA GSTSLNQGPQSLSYSPTENAVLVCSEVDGGSYELYIVPKDSISRGDTVQDAKKGPGGSAV FVARNRFAVLDKTSNQVIVKNLKNETVKKSGLPITTDSIFYAGTGNLLCRAEDKVVIFDL QQRVVLGSLQTPFVKYIVWSNDMETVALLSKHAIVIASKKLDHLCTLHETIRVKGGAWDD NGVFIYTTLNHIKYCLPNGDNGIIKTLDIPIYITKVSGNKIFCLDRDGKSKVIVIDATEY IFKLSLLRKKYDNVMNMIRNSNLCGQAMIAYLQQKGFPEVALHFVKDESTRFNLALNSGN IQIAVAAAKEIDEKDHWYKLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNMEKLS KMLKIAEVKNDVMGQFHNALYLGNIRERVTILEKAGHLHLAYITASVHGLHDVTERLAAE LGNIPELPKGKVPSLLMPPTPVTRGGDWPLLRVMKGIFEGGLDNVSNKVVAGDEEEENDG DWGEELDLIDVDGIENGVSQEIGEDNEENDEEGGWDLEDLELPPEADTPKASRSSHSSVF VAPTSGIPVSQLWIQKSSLAAEHVAAGNFDTAMRLLHRQLGMKNFTPLRSLFIDLHFGCH SYLNAFPSVPVLSIPIERGLTESTASRGPPALVFNFPQLEEKLKVAYKAFTSGKFSEALR GFLNILHTIPLIVVESRREVDEVKELILIVKEYVLALQMELKRKEIKDNPIRQQELAAYL THCKLQVPHLRLVLLNAVKLSYNAKNNNTAVNFARRFLETNPTNENQAKTARQVLQAAEK NLIDSSKLNYDFRNPFVICGATYVPIYHGQKKVLCPYCSSNFLPSEEGKLCSVCDLSVIG LDASGLLCSPSQVR NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgttgacaaaatttgagacaaaaagtaatagagtgaagggactaagtttacattcgaaa agaccatggattctagcaagtttacatagtggtgtgatacagttatgggattacagaatg gggacattgattgataagtttgatgaacatgatggtcctgttcgtggtgtccattttcac gtcatgcaacctttgtttgtgtctggaggagatgattacaagattaaggtttggaactac aagttgcacagatgtctcttcactctgctcggacatcttgattacatccgtactgtgcaa tttcatcatgaatctccctggatagtgagtgcaagtgatgatcagactgttagaatttgg aactggcagtcacggacatgtctttctgttttaactggtcacaatcattatgtgatgtgt gcatccttccaccctaaagaagatcttgtggtgtcagcttcacttgaccagacagttcgt gtttgggatattggatccctaaggaacaaaaatccatcacctgctgatgacctgatgaat aatttaagtcagattaactctgatctttttggtggaattgatgttgttgtgaagtatgta ctcgaaggtcatgatcgaggagtcaactgggcctcatttcatcccacattgcctctgatt gtctcaggtgctgatgatcgtctgctgaagctgtggcgaatgaacgacacgaaggcttgg gaagtggatacattgagagggcatgtaaataatgtatcatgcgttatgtttcacaccaaa caagatataattgtttccaactcggaagacaaaagcattcgtgtttgggacgtgacaaaa cgtactggtattcatacttttcgaagagaacatgatcgattctggatacttgcatgtcac ccggaaatgaatctttttgcagctggacatgacagtgggatggttgtttttaaacttgaa agagaaaggcccgctttctctgtaagtggtgattctatgttctatgctaaagatcgcttc ttgaaatattatgagttctcgactcagaaagaaacacaagtgatgcccatccgacgggca gggtcgacatctttgaatcagggcccacaatctctttcatatagtcctacagaaaatgcg gttctcgtatgttcagaagttgatggtgggtcttatgagttatatattgtacccaaagac agtatcagcaggggcgatacagtccaagatgcgaagaaaggacctggagggtcagcagtc tttgttgcccgaaatcgatttgctgtgcttgacaaaaccagtaatcaagtgatagtcaag aatctaaagaacgagactgttaagaaaagtggacttccaattactacagattctattttc tatgctgggacgggtaatttactatgccgggccgaagataaagtggttatttttgatctt cagcaacgagtcgttcttggtagtcttcaaacgccttttgtcaagtatattgtctggtca aatgacatggaaaccgtggccttactgagcaagcatgccatagttatagctagcaagaag cttgaccacctatgcactcttcacgagacaattcgtgtcaagggtggtgcctgggatgac aatggtgttttcatctatacgaccctgaatcacatcaagtattgtcttcccaatggagac aatggaataataaagacccttgatatccctatatacatcacaaaagtttcagggaataaa atattctgcttggatcgggatggaaagagcaaagttatagttatcgatgcaacagaatat atatttaaattgtcgttactaagaaaaaaatacgacaatgtcatgaatatgatccgaaat tcaaatctttgtggacaagccatgattgcttatctacaacaaaagggatttcctgaagtt gcccttcattttgtgaaagatgaaagtactcgtttcaatttagcactcaatagtgggaat attcagatagcagttgctgcggcgaaggagatagatgagaaggatcattggtataaacta ggggtggaggctcttcgacagggtaatgctggaattgtggagtatgcttaccaaaaaacg aagaattttgagagattatcatttctttacttgattactgggaacatggagaagctatca aaaatgcttaaaattgctgaagttaagaatgatgtcatgggtcagtttcataacgccctt tatttgggtaatattcgggaacgtgttactattttagaaaaggcaggtcatttacatctt gcttacattactgcttctgttcatgggcttcacgatgttactgaacgacttgcagctgag ttgggtaacattcccgagttgcctaagggcaaggtaccttcacttctgatgccaccaact cctgtcacccgtgggggagattggccacttttgagggtcatgaaaggaatctttgagggc ggtcttgacaatgtaagtaataaggttgttgctggcgacgaggaagaggaaaatgatggt gattggggtgaggaactggatttaattgatgtggatggtattgaaaatggggttagtcaa gaaatcggtgaagataatgaagaaaacgacgaggaaggagggtgggatcttgaagatttg gagcttcctcctgaggccgacactcctaaagcttctagaagctcccattcatctgttttt gtggcccctacttctgggatccctgtcagccaactttggattcaaaaatcctcactagct gctgaacatgtagcagctggtaactttgataccgcaatgagattattgcatcgacaattg ggaatgaaaaactttactcctttgagatcgttgttcattgatcttcattttgggtgccat tcttatctgaatgctttcccgtctgttcccgtattgtctataccaattgaacggggtttg actgagtcaactgcctcgagggggccacctgcacttgtgtttaactttcctcaactggaa gagaaattaaaagtggcttataaagcctttacatccggaaagttttctgaggcccttcga ggttttttgaatattcttcacacaattcctcttattgtggttgagtcaagacgagaagtt gatgaagtgaaggaactgattcttattgtaaaagaatacgttttggctctacaaatggag ctcaaaagaaaagaaattaaagataaccctattcgtcaacaagagcttgctgcttatctt acccactgtaaacttcaagttccacatctgaggctcgtgttactaaatgctgtgaagtta tcttacaatgcaaagaataataacaccgctgtgaattttgctagacggtttctagagaca aatcccaccaatgagaatcaagcaaagacagcaagacaagtgttgcaggcggcagaaaag aatctgatcgattcatctaagctaaactatgatttcagaaatccgtttgtgatttgtgga gcgacttatgttcccatttatcatgggcagaaaaaagttttgtgcccatattgcagctcc aattttctaccgagtgaagaagggaagttgtgtagtgtatgtgatctttcagtgataggt cttgatgcttcagggttgttatgttctccgtctcaggtgaggtga

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