Erigeron canadensis (horseweed): 122591195
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Entry
122591195 CDS
T07610
Name
(RefSeq) eukaryotic initiation factor 4A-10-like
KO
K03257
translation initiation factor 4A
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122591195
03012 Translation factors [BR:
ecad03012
]
122591195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122591195
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122591195
mRNA cycle factors
Stress granule specific factors
122591195
Translation factors [BR:
ecad03012
]
Eukaryotic type
Initiation factors
eIF-4
122591195
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122591195
Exosomal proteins of bladder cancer cells
122591195
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
122591195
NCBI-ProteinID:
XP_043619352
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Position
3:36803218..36806546
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AA seq
411 aa
AA seq
DB search
MAGVAPEGSQFDYRQFDSKMSELSADEDFFRSYDEIHESFDAMGLQENLLRGIYAYGFEK
PSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLNYNAVECQALVLAPTRELAQ
QIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRESLRSDH
IKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRIL
VKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSR
DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN
YLHRIGRSGRFGRKGVAINFVTLDDEKMLGDIQKFYSVTVEELPSNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttgcaccagaagggtcccaatttgattaccgacaatttgactccaaaatg
agcgaactttcagctgatgaagacttcttccggtcatatgatgagatccatgaaagcttt
gatgccatgggtctacaagaaaatctattgaggggcatttatgcatatggttttgagaaa
ccatcagccatccaacagaggggtattgttccttttaccaagggtcttgatgtaattcag
caagcacaatctgggacaggaaagactgccactttctgttctggtattcttcaacaactc
aactataatgcagtagaatgtcaagctttagttctagcaccaactcgtgagttggcacag
caaattgagaaagtcatgcgagctcttggtgactaccttggcgtaaaggttcatgcttgt
gtgggtgggaccagtgttcgtgaggaccagcgtattctctcagctggggttcatgtcgtt
gttggtactcctgggcgtgtgtttgacatgttgcgaagggagtcccttcgatctgatcac
ataaaaatgtttgtattggatgaggctgatgagatgctttcaagaggtttcaaggaccag
atctatgatatcttccagctgttgccttcaaaggttcaagttggggtgttctctgcaaca
atgccaccagaggcccttgaaattacccgaaagtttatgaacaaaccagtgaggattctc
gtcaagcgtgatgagctcaccttggaaggtatcaagcagttctatgttaatgtagaaaaa
gaggattggaagctcgagaccctctgtgatctttacgagactttagcaatcacccaaagt
gtcatttttgtgaacacccgaaggaaggttgactggttaaccgacaaaatgagaagccgt
gaccacactgtctcagccacacacggtgacatggaccagaacacgcgagacatcatcatg
cgtgagtttcgatctggttcatctcgtgttctcatcaccactgatctgctggcacgtggt
atcgatgtccagcaagtctcacttgtcataaactacgatcttcctacccagcccgaaaac
taccttcatcgtattggtcgtagtggacgatttggaagaaagggtgtggctattaacttt
gtgacgttggatgatgagaagatgcttggcgatatccagaagttttacagtgtgaccgtt
gaggagcttccatcgaatgttgccgatctcatctga
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