Erigeron canadensis (horseweed): 122591363
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Entry
122591363 CDS
T07610
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03420
Nucleotide excision repair
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122591363
09124 Replication and repair
03420 Nucleotide excision repair
122591363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122591363
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122591363
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecad04147
]
122591363
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
122591363
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122591363
TCR (transcription coupled repair) factors
Cul4-CSA complex
122591363
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122591363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122591363
NCBI-ProteinID:
XP_043619567
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All DBs
Position
3:44564365..44572905
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AA seq
824 aa
AA seq
DB search
MSSQSQQPSNTNRKRSSTTTFSPPSPSSTTTAGGGAPPHFPAMKKAKSQGVSSCSFDNKN
GFQFDNNNNNSSDSSMIEDPSEHTSSGGGFTPNLGRKKATPPQPAKKLVIKLVKAKPTLP
TNFEENTWAILKSAISAIFLKQPDPCDLEKLYQAVNDLCIHKMGGSLYQRIERDCEAHIS
AALQSLVGQSEDLVVFLSLVQKTWQDFCDQMLMIRSIALFLDRTYVKQAPAVRSLWDMGL
QLFRKHLSLASEVEHKTVFGLLKMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEKPF
LECTSEFYAAEGVKYMQHSDVPDYLKHVEVRLHEEHDRCLLYLDASTRKPLVATAERQLL
ELHISAILDKGFTMLMDGNRSQDLRRMYTLFSRVSALESLRHALSSYIRKTGQSIVTDEE
KEKDMVSSLLEFKMSLDKIWEESFSKNDVFSNTIKEAFEHLVNLRQNRPAELIAKFLDEK
LRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMI
SKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIELSVHVLTTGYWPT
YAPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQ
TVVLMLFNDAQNLSFQDIKDATSIEDKELRRTLQSLACGKVRVLQKIPKGRDVDDGDMFM
FNDVFTAPLYRIKVNAIQLKETVEENASTTERVFQDRQYQVDAAIVRIMKTRKILSHTLL
ITELFQQLKFPIKPVDLKKRIESLIDREYLERDKTNPQIYNYLA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcaatctcaacaaccttcaaacaccaaccgcaaacgctcatctacaaccacc
ttctcaccaccatcaccatcatccaccaccactgccggcggcggagctccacctcacttt
ccggcgatgaaaaaagcgaaatcccaaggcgtatcttcttgctcttttgacaataaaaac
ggatttcaatttgataataataataataattcttcagatagttcaatgattgaagatcca
agtgagcatacatcttccggcggtggatttactccaaatttaggccggaaaaaagctact
cctcctcaacctgctaaaaaactcgttatcaagcttgttaaagccaagccgaccttgccg
acgaattttgaggagaatacatgggcaatcttgaagtcagcaattagtgccatattcttg
aagcagccagatccttgtgatttggagaagctttatcaagccgtcaatgatctatgcatc
cacaagatggggggaagtctttaccaacgtattgagagggattgtgaagctcacatatct
gctgctttacaatcattagttggccaaagtgaagaccttgtggttttcttatcacttgtg
cagaaaacttggcaagatttttgtgaccagatgttgatgatccgcagtattgcgttgttt
cttgaccgtacatatgtgaaacaagccccagctgtgcgatcactttgggacatgggcctt
caacttttccggaagcatctatcactagcttcagaagtcgagcacaaaacagtttttggt
ctgctgaaaatgatagagagtgagagattaggtgaagcagttgatagaacactccttaac
catctcctgaagatgtttactgcattgggtatttattctgagagttttgagaagccgttc
cttgaatgtacctcagaattctatgccgctgaaggagtaaaatatatgcaacactctgac
gttccagactatttgaaacatgtggaggtaaggttgcatgaagaacacgacagatgtctt
ctgtatctcgatgccagtacaagaaaaccattggtagcaaccgctgaaaggcaacttctt
gagctccatatttctgctatacttgataagggtttcacaatgttaatggatggtaatcga
agtcaagatcttcgaaggatgtatacacttttctctagggtaagtgcccttgaatcctta
cggcatgcccttagctcatacatccgaaagacagggcagagcattgtaaccgatgaagag
aaggagaaggatatggtgtcctcactattagaattcaagatgtcacttgataaaatatgg
gaagaaagcttctcaaagaacgatgttttttccaatacaatcaaagaggcttttgaacat
cttgttaatctccgccaaaatcgtcctgctgagttgattgcaaagtttttggatgagaaa
ctccgtgctggaaataagggtacatctgaggaagagttggagggaactcttgataaagtc
ttggttctgttcagatttatacagggtaaggatgtgtttgaagccttctataaaaaggat
cttgcaaaaaggcttcttttgggcaagagtgcttctattgatgctgaaaagtctatgatc
tccaagttgaaaaccgagtgtggtagccagttcaccaacaagcttgaaggaatgtttaag
gacattgagctatcaaaggagataaatgaatctttcaagcaatcatctcaagctaggaca
aaacttccgtcaggaattgaactgagtgtccatgttttaacaactgggtactggccaact
tatgcaccgatggatgtccgccttccccacgaactgaatgtttatcaggatatttttaaa
gaattctacttgagcaaatatagtggtaggcgattaatgtggcaaaattcattaggtcac
tgtgtcttgaaagcagagttcccaaagggcaaaaaagagctggcagtttctctatttcag
accgttgttttgatgctgttcaatgatgcacaaaatcttagttttcaagatattaaggat
gctacaagcattgaggacaaggaactgagaagaactttgcagtcccttgcatgtgggaaa
gtccgtgtcctccaaaagataccgaaaggtagagatgtggatgatggcgacatgttcatg
ttcaatgatgtttttacagctcctctgtatcgtataaaggttaatgctatccagttaaag
gaaactgtggaagaaaatgcaagcactacagagagagtattccaagatcgtcaatatcag
gttgacgctgcaattgttcggataatgaaaactaggaaaattctgagtcacacacttctg
ataactgaactctttcagcagctgaagtttcctataaaaccggttgacttgaagaagagg
attgaaagcctgattgacagggagtatctggaaagagacaagaccaaccctcagatatac
aattacctagcatga
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