Erigeron canadensis (horseweed): 122591364
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Entry
122591364 CDS
T07610
Name
(RefSeq) WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122591364
03036 Chromosome and associated proteins [BR:
ecad03036
]
122591364
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122591364
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122591364
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122591364
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
122591364
DSBR (double strand breaks repair)
Other DSBR factors
Others
122591364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
CyRPA
Motif
Other DBs
NCBI-GeneID:
122591364
NCBI-ProteinID:
XP_043619568
LinkDB
All DBs
Position
3:complement(7418931..7422788)
Genome browser
AA seq
465 aa
AA seq
DB search
MTRNKKVAEYERKRLENIKRNEELLVSLNIKSTLSDLSASAFKLRQHRAGTKSYKLSSKK
KVRSETPIVIRRSLRAQGKAPKKLPKLKSQVIPNEPPRELFPISMRDAITSSESDEALVS
KILSVCKKSGLENGDYGKKKFRVMASIDLDSMELVPENIARVVPKRIVSVKFFPSADMSM
VAVGNNLGDVGFWNVDSEDKDGDGIYIYHPHSAPVSAIVIQPFSLNKIFTCCYDGQVRSL
DVQKEMFDLAYSTEHAIISMSQRPDDVNSLYIGEGHGVVHSWDERSGKTSFSWELHESRI
NTIDFNPENLNMMATSSTDRTVCIWDLRKLGKSKPDSLKMITCERGVQSAYFSPSGSHLA
TTSVDVKIGVLSGTNYDNEVMIYHNNKTGLLISAFKGIWGWDDSHIYVGNMKRGVDIISA
EKRRVVTTLDSSHITAIACRFDAHPLKPGMLAGATWGGQVYIWST
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggaataagaaagtagcagaatatgaacggaaacgactcgaaaacatcaagcgc
aacgaggaactgctcgtttctctcaacatcaaatcaacactttccgatctctctgcctcc
gccttcaagctgcggcagcacagggcagggactaaatcatacaaacttagttcaaagaaa
aaagtgagatctgaaactccaatcgtaattcgtagatctttaagagcccaaggaaaagca
cctaagaaattacccaaactaaaatcacaggttatccctaatgagcctccgcgagagttg
tttccgattagtatgagagatgcaattactagctccgaatcggatgaggcacttgtcagt
aaaattttgagtgtttgtaagaagtctggattggaaaatggtgattatgggaagaaaaag
tttagggttatggcttccattgatttggattcgatggagttggtaccagagaacattgct
cgtgttgtgccaaaaaggatagtgagtgttaagttctttccgtccgcagatatgagtatg
gttgccgtggggaataatttaggagatgtagggttttggaatgtggattcggaagataag
gatggtgatgggatttacatatatcatcctcattcggcacctgtctcagcaattgttatt
caaccattttcgttgaacaagatatttacatgctgttatgatggtcaagttcgctcatta
gatgttcaaaaggagatgtttgaccttgcatattccactgaacatgcaataatatctatg
tctcaacgacctgacgatgttaactccttgtatattggtgagggtcatggagtagttcat
agctgggatgagaggtccgggaagacgtcattttcatgggagctgcatgagagtagaatt
aatacgatagattttaatccagaaaatcttaatatgatggctacaagttcaacagataga
actgtctgcatttgggatttgagaaaacttggtaagagcaagcctgactctcttaagatg
attacttgtgagaggggtgtacagtctgcctacttctctccttcaggaagccatctcgct
acaacaagcgttgatgtcaagattggagtgctaagcgggacaaattatgataatgaagtc
atgatataccataacaataagacaggcttgttgatttctgcattcaaaggtatatggggc
tgggatgactctcatatatatgtgggaaacatgaaaaggggagttgatattatttccgca
gaaaagaggagagttgttactactcttgatagctctcacattactgcaatcgcatgtcgt
tttgatgctcatccgttgaagcctgggatgcttgcaggggcgacatggggaggtcaggtt
tatatctggagcacataa
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