Erigeron canadensis (horseweed): 122591374
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Entry
122591374 CDS
T07610
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00500
Starch and sucrose metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122591374
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecad01003
]
122591374
Enzymes [BR:
ecad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
122591374
Glycosyltransferases [BR:
ecad01003
]
Polysaccharide
Storage polysaccharide
122591374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
PMEI
Motif
Other DBs
NCBI-GeneID:
122591374
NCBI-ProteinID:
XP_043619579
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All DBs
Position
3:43402559..43410685
Genome browser
AA seq
997 aa
AA seq
DB search
MAGKLSTWFVLSSGSSSHGWNDDCKKHYFSLRLFPRSLVSCKMRPQRSSNSLPRPRRPQA
KKIFPAQLPQSDNLVPDGSGHSDSENTDDISALSSNSISKDIVAIQRYDDRNSSNKLNLS
IGADKVNELSTVNIQDVIGMIRNAEKNIHILNQARIHAIEDLEKILGEKETLQREINSLE
MRLAETDARIRVAAQDKIHVELLQDHLEKLQTEMSNRNEIQDIVLRSPDRQTRVLSEELN
ILRNENMSLKNDLMRLQEELSEVKKTDERVEMLEKERSILESSLKELEYKLTYSQEDDSQ
LSTLRSEYETLWDKVEHLQGLLDKSTSQADQAILVLQQNQELRKKVERLEESLEDASIYK
LSSEKLQQYNDLMQQKIKLLDERLERSDAEIHSYVQLYQDSVKEFQDTLDNLKEESKKKA
SGKHVDMPWEFWSRLLVMFDAWSLEKKIDGDEAKLLRDMTWKKDTRIHDVYMECKDKNER
ETITAFRKLTSLSSSPGLHVIHIAAEMAPVAKVGGLGDVLSALSKALQKKGHLVEIILPK
YDCMQYESIQDLRVLDIVVESYFDGQLFKNKIWVGTVEGLPVYFIEPLHPAKFFWRGKTY
GEPDDLKRFSFFSRAALELLYQAGKKPDIIHCHDWQTAFVAPLYWDIYAPKGLNSARICF
TCHNFEYQGTAPAAEIASCGLDIHHLNRPDRMQDHSSTDRINPVKGAIVYSNIVTTVSPT
YAQEVRTSKGGQGLHATLNAHAKKFVGILNGIDTDAWNPATDGYLRFQYNANDLDGKAEN
KKALRRHLGLSIANSRRPLVGCITRLVPQKGVHLIRHAIYRALELGGQFVLLGSSPVPSI
HREFEEIANKFQTHEHVRLILKYDEALSHTIYAASDMFIIPSIFEPCGLTQMIAMRYGAI
PIVRKTGGLNDSVFDVDDDTIPVQLRNGFTFVTPDEQGFNGAYDRAFNHYNSDSEGWQEL
MRKVMSIDFSWDTSAAQYEELYQQSVAKARAVNRAAG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaagctatcaacgtggtttgtattaagcagcggcagcagcagtcatggatgg
aatgatgattgtaagaagcattatttcagtttgcggctgtttcctcgatcattggtttcc
tgcaaaatgcgtccacaacgctccagtaatagcttgccacgacccaggaggcctcaagca
aagaaaattttcccagcacaacttccccaaagtgacaacctcgtgccagatggcagcgga
catagtgattcagagaatacagatgacatatcagctttatccagcaactctatatctaag
gatatagtagcaattcaacgttacgatgatagaaattccagcaataaattgaacctgtct
attggtgcagataaagtgaatgagctctccactgtaaatattcaagatgtaattgggatg
atacgaaatgcagagaaaaatattcatatcctaaaccaagctcgcatccatgcaattgaa
gatttagaaaagatacttggtgaaaaagagaccttgcaaagagagattaacagtttggag
atgaggctggctgaaactgatgcacggatcagagttgctgcacaagataagatacacgtg
gagctattacaagaccatttagagaagcttcaaacagaaatgtccaacagaaatgaaatt
caagatattgttctccggtctccagatcggcaaacccgtgttttaagtgaggagctgaat
attttaaggaatgagaacatgtccctgaaaaatgatttaatgagacttcaggaggagctt
agtgaagtcaagaaaacagatgaacgtgttgaaatgctggagaaagaacgatctattttg
gagtcttcactgaaggagttggagtacaagcttacttattcccaggaggacgactcacaa
ctttcaactttaagatcagagtacgagaccctatgggataaggtagagcatttgcaagga
ttacttgataagtcaactagccaagcagatcaagctatattggtattacagcaaaaccag
gagttgagaaaaaaggttgaaaggctggaagagtcccttgaagatgctagtatttacaag
ttatcatcagaaaagttgcaacagtacaacgacctaatgcaacagaaaataaagctactt
gatgaaagattagaaaggtctgatgcagagatacattcttatgtacagctatatcaagac
tctgtgaaggagtttcaagatacacttgataacttaaaagaggaaagtaagaaaaaagca
tcaggtaaacatgtcgacatgccatgggaattctggagtcgtttattggtcatgtttgat
gcttggtctcttgaaaagaaaattgatggcgatgaggctaagctgctcagggatatgaca
tggaaaaaggatacacgtatccatgatgtgtacatggaatgcaaggataagaatgaacgt
gaaactatcactgcttttcgtaaattgacatctttatcatccagtccaggattgcatgtt
attcatattgctgctgagatggcaccagttgctaaggttggtggtctaggggatgtgttg
tctgctcttagtaaagcactacagaagaaagggcacctcgtggaaataattctcccaaaa
tatgattgcatgcagtatgaaagtattcaggatttgagggtcttagatatagtggtagag
tcatattttgatggccaattgtttaagaataaaatttgggttggtactgttgaagggctt
ccggtgtactttattgagcctcttcatcctgctaaatttttctggagagggaaaacctat
ggggaacctgatgatttgaagcgtttctctttctttagcagggcagcacttgaactgctt
tatcaagctggcaaaaaaccagatattattcactgtcatgattggcagactgcttttgtt
gcacccctctactgggatatttatgcacctaaaggactaaattcggctaggatatgcttc
acatgtcacaatttcgagtatcaaggtactgcacctgctgcagaaatagcatcttgtggc
cttgacattcaccaccttaaccgaccagataggatgcaggaccattcatcaactgacaga
ataaatcctgtaaagggtgctatcgtgtactccaacattgtcacaacagtatcaccaacc
tatgcacaagaggtgcgaacttcaaagggaggacaagggctacatgcaacccttaatgct
catgctaaaaagtttgtggggattctgaatggaattgatactgatgcttggaatcctgcc
actgatggctatctcagattccagtataatgccaatgatctcgatgggaaggctgagaat
aaaaaagccctaagaagacatcttgggctttctattgcaaacagtaggaggccattggtt
ggctgtataacaagattggtaccacagaagggtgtgcatctgatcaggcatgcgatttat
cgagcattggaattgggaggacagtttgtattgctgggttcgagccctgtgccaagtatt
catagagaatttgaggaaatcgcgaacaaatttcaaactcatgagcatgttcggctgatt
ttgaaatacgatgaagctctttcccatacaatatacgcagcatcggacatgtttatcatc
ccatctatatttgagccttgcggcttaacacagatgatagccatgaggtatggtgcaatc
cccattgttagaaagacagggggtctaaatgacagtgtctttgatgttgatgatgatacg
ataccagttcaattaagaaatggatttacatttgtaacaccggatgagcagggattcaat
ggtgcttacgaccgcgccttcaaccactacaatagtgacagcgaaggttggcaagagcta
atgcgcaaggtcatgagcatagacttcagttgggatacatcagcggcacaatatgaagaa
ctgtaccaacaatcagtagctaaagcgagagcagttaatcgtgcagctggctaa
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