Erigeron canadensis (horseweed): 122591502
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Entry
122591502 CDS
T07610
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03060
Protein export
ecad04141
Protein processing in endoplasmic reticulum
ecad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
122591502
04141 Protein processing in endoplasmic reticulum
122591502
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122591502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122591502
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecad02044
]
122591502
Membrane trafficking [BR:
ecad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
122591502
Secretion system [BR:
ecad02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
122591502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
GPHR_N
Motif
Other DBs
NCBI-GeneID:
122591502
NCBI-ProteinID:
XP_043619702
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Position
3:complement(8388924..8395422)
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AA seq
544 aa
AA seq
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MLITGGEIASSSSSSASTQCYLSCKFRTPFHYKRNNNNICRATLSVHTRRTKNNTLLSTS
CESSNFDPLGINTGKTSGLGSAWESVLGLFSETFESSFGTKNDKSSPSRGAAAAIEDTSI
DFGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNREAFVGNLDQNSILSTLDTFSGGG
IGRLGICSLGIVPFINASIVFQLLTQIYPKLQELQKREGEAGRKKILQYTRYASVGFAVV
QAIGQALFLRPYVEDFSTQWVLSSVILLTLGSVLTTFIGERITDLKLGNGTSLLIFTSII
SYLPASFGRTVAEAFQDGNYTGLAAIVFSFFLLVLSIVYVQEAERKIPINYASRYSSKSG
GLQKSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLNVLKNAAIGLNPGGAFYLPTN
ILLIGFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIRTVLSRISVLGSVFL
AVLAAGPAVVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYEIDK
DTTF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacagggggagagattgcgtcatcatcttcatcatctgcttcaacacaatgc
tacctttcttgcaaatttcgcactccatttcattataaaagaaataataataatatttgc
agagccacactttctgtccacacaagaagaaccaaaaacaacactctcttatccaccagc
tgcgagagctctaattttgatccactaggtatcaatacaggtaaaacatcaggtctgggt
tctgcttgggaaagtgttttgggattgttttcagagacatttgaaagttcatttggtaca
aaaaatgataaatcttccccatctagaggagcggcagctgcaatagaggacacttccatc
gattttggtgacttcttcaaaggcccattacctggaaagtttcttaaacttttggggtac
ttagctttgtctcgactcggaatatacataccacttggtggagtgaaccgagaagcattt
gtagggaacttggaccaaaacagtattttaagtactttggacacattttctggaggagga
ataggtcggctcgggatatgctcccttggtatagtcccgttcattaatgcatctatcgtg
tttcaacttcttacacaaatttaccccaagttacaagaacttcaaaaaagagaaggtgaa
gcagggagaaagaaaattcttcagtatactcgatatgcttctgttgggtttgctgtggtg
caggcaattggtcaagcactgtttcttcgtccatatgtcgaagacttcagcactcagtgg
gtcttatcttctgttatcttattaacacttggatcagtgttgacaacatttattggagaa
agaatcacagatttaaaacttggaaatggtacgtcacttctgatttttacaagcatcatc
tcctatctgccagcatcatttggtagaacagttgccgaggcttttcaagatggtaattat
acgggtctagctgccatcgttttttcattcttcctgctagttcttagcatcgtctatgtt
caggaagccgaaagaaaaattcctattaattatgcttcaaggtacagtagtaaatcaggg
gggcttcagaaatctgcctacctgcctttcaaggtcaacagttcgggagtaatgccaatc
atattctccacgtcatcattagctcttcctgccactctagcacggtttactggtttaaat
gttctaaaaaatgccgccatcggcttgaatccagggggtgctttctatctcccaacaaac
atattattgataggcttctttaactattactacactttcctacaactggatcccgatgat
gtcagtgaacagttgaagcgtcaaggtgcctccattcctctggtacggcctggcaaaagc
acagcggcattcatcagaacggttttaagtaggatatcagttttagggtcagtatttttg
gcggttcttgcagctgggcctgctgttgtggaacaaacgacacacctcacagctttccgt
ggatttgcgggtacctcagtcttaattctggttggttgtgctacagacacggcaagaaaa
gttcaagcagagataatttctcagaaatacaagaacatcgagttctatgaaatagacaaa
gataccaccttctaa
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